RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PTPRBP23467 1997 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 FAT2Q9NYQ8 4349 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 PTPRSQ13332 1948 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 KIF13BQ9NQT8 1826 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 HUWE1Q7Z6Z7 4374 aaKnown RBP0.64□□□□□ -2.31
ITGB1-216ENST00000493758 TTC21AQ8NDW8 1320 aa0.64□□□□□ -2.31
ITGB1-216ENST00000493758 NBASA2RRP1 2371 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 CPAMD8Q8IZJ3 1885 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 MAGI2Q86UL8 1455 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 TRAV14DV4A0A0A6YYC5 116 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 A0A0D9SG52 128 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 DPRXA6NFQ7 191 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 CLDN24A6NM45 220 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 TMEM212A6NML5 194 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 RPP14O95059 124 aaKnown RBP0.63□□□□□ -2.31
ITGB1-216ENST00000493758 CRYZL1O95825 349 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 IGKV1-5P01602 117 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 SHBGP04278 402 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 SERPINA6P08185 405 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 HTR1AP08908 422 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 RPL5P46777 297 aaKnown RBP0.63□□□□□ -2.31
ITGB1-216ENST00000493758 SURF2Q15527 256 aaPredicted RBP0.63□□□□□ -2.31
ITGB1-216ENST00000493758 ACOT6Q3I5F7 207 aaPredicted RBP0.63□□□□□ -2.31
ITGB1-216ENST00000493758 KHDC3LQ587J8 217 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 LCN15Q6UWW0 184 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 DPPA3Q6W0C5 159 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 CLDN22Q8N7P3 220 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 C12orf29Q8N999 325 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 C9orf163Q8N9P6 203 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 ZNF439Q8NDP4 499 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 TOMM6Q96B49 74 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 PPP1R14BQ96C90 147 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 PPP1R2P1Q96PQ5 205 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 NIPSNAP1Q9BPW8 284 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 CMSS1Q9BQ75 279 aaKnown RBP0.63□□□□□ -2.31
ITGB1-216ENST00000493758 C11orf68Q9H3H3 251 aaKnown RBP0.63□□□□□ -2.31
ITGB1-216ENST00000493758 SLC39A9Q9NUM3 307 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 PKIGQ9Y2B9 76 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 SNURFQ9Y675 71 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 TMEM56-RWDD3S4R434 201 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 MUC12Q9UKN1 5478 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 A0A0G2JMZ2 1700 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 LRRIQ1Q96JM4 1722 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 PTPRGP23470 1445 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 SMG6Q86US8 1419 aaKnown RBP0.63□□□□□ -2.31
ITGB1-216ENST00000493758 ERBINQ96RT1 1412 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 DMBT1Q9UGM3 2413 aaPredicted RBP0.63□□□□□ -2.31
ITGB1-216ENST00000493758 APC2O95996 2303 aa0.63□□□□□ -2.31
ITGB1-216ENST00000493758 NHSQ6T4R5 1651 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 NUMA1Q14980 2115 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 SSC5DA1L4H1 1573 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 GREB1Q4ZG55 1949 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 NUP155O75694 1391 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
ITGB1-216ENST00000493758 EXOC1LA0A1B0GW35 172 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 PQLC2LA1A4F0 135 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 OR4C46A6NHA9 309 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 FAAHO00519 579 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 PIRO00625 290 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 CHP2O43745 196 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 LYPLA2O95372 231 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 RPS17P08708 135 aaKnown RBP0.62□□□□□ -2.31
ITGB1-216ENST00000493758 ZNF846Q147U1 533 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 KISS1Q15726 138 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 SPANXN5Q5MJ07 72 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 C10orf55Q5SWW7 151 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 MIR17HGQ75NE6 70 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 DEFB128Q7Z7B8 93 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 CLVS1Q8IUQ0 354 aaPredicted RBP0.62□□□□□ -2.31
ITGB1-216ENST00000493758 KRT222Q8N1A0 295 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 Q8N2B8 174 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 MNS1Q8NEH6 495 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 OR4E2Q8NGC2 313 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 OR4D11Q8NGI4 311 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 PFN4Q8NHR9 129 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 H1FXQ92522 213 aaKnown RBP0.62□□□□□ -2.31
ITGB1-216ENST00000493758 BORCS7Q96B45 105 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 C8orf76Q96K31 380 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 PARD6GQ9BYG4 376 aaPredicted RBP0.62□□□□□ -2.31
ITGB1-216ENST00000493758 REG4Q9BYZ8 158 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 CCDC90BQ9GZT6 254 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 UBAP1Q9NZ09 502 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 DUOX2Q9NRD8 1548 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 KMT2DO14686 5537 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 HFM1A2PYH4 1435 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 UACAQ9BZF9 1416 aa0.62□□□□□ -2.31
ITGB1-216ENST00000493758 NCOA2Q15596 1464 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 DSTQ03001 7570 aaKnown RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 SPTBN1Q01082 2364 aaKnown RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 SRRM2Q9UQ35 2752 aaKnown RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 IGKV2D-26A0A0A0MRZ7 120 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TRAV26-2A0A0B4J265 109 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 KPNA3O00505 521 aaPredicted RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TCL1BO95988 128 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 TTRP02766 147 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 CLPSP04118 112 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 RBP1P09455 135 aa0.61□□□□□ -2.31
ITGB1-216ENST00000493758 PRB4P10163 310 aaPredicted RBP0.61□□□□□ -2.31
ITGB1-216ENST00000493758 S100A4P26447 101 aaKnown RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms