RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SMIM4Q8WVI0 70 aa9.52□□□□□ -0.89
SAMM50-204ENST00000493161 Q9H8V8 135 aa9.52□□□□□ -0.89
SAMM50-204ENST00000493161 SHPKQ9UHJ6 478 aa9.52□□□□□ -0.89
SAMM50-204ENST00000493161 PAIP2BQ9ULR5 123 aaKnown RBP9.52□□□□□ -0.89
SAMM50-204ENST00000493161 DUSP14O95147 198 aaKnown RBP9.51□□□□□ -0.89
SAMM50-204ENST00000493161 AKAIN1P0CW23 69 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 HTN1P15515 57 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 AKR1C4P17516 323 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 ORM2P19652 201 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 ATP5IP56385 69 aaPredicted RBP9.51□□□□□ -0.89
SAMM50-204ENST00000493161 DLK1P80370 383 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 SSBP1Q04837 148 aaKnown RBP9.51□□□□□ -0.89
SAMM50-204ENST00000493161 SAMD13Q5VXD3 122 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 GPR141Q7Z602 305 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 CLVS1Q8IUQ0 354 aaPredicted RBP9.51□□□□□ -0.89
SAMM50-204ENST00000493161 LINC01587Q99440 93 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 KCNIP3Q9Y2W7 256 aa9.51□□□□□ -0.89
SAMM50-204ENST00000493161 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
SAMM50-204ENST00000493161 BOLA2-SMG1P6H3BVE0 249 aa9.5□□□□□ -0.89
SAMM50-204ENST00000493161 PITX3O75364 302 aa9.5□□□□□ -0.89
SAMM50-204ENST00000493161 FGL1Q08830 312 aa9.5□□□□□ -0.89
SAMM50-204ENST00000493161 CLINT1Q14677 625 aa9.5□□□□□ -0.89
SAMM50-204ENST00000493161 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
SAMM50-204ENST00000493161 OR1B1Q8NGR6 318 aa9.5□□□□□ -0.89
SAMM50-204ENST00000493161 PRRT1Q99946 306 aa9.5□□□□□ -0.89
SAMM50-204ENST00000493161 RGS5O15539 181 aa9.49□□□□□ -0.89
SAMM50-204ENST00000493161 B2MP61769 119 aa9.49□□□□□ -0.89
SAMM50-204ENST00000493161 HIST1H1AQ02539 215 aaPredicted RBP9.49□□□□□ -0.89
SAMM50-204ENST00000493161 GGNBP1Q5YKI7 109 aa9.49□□□□□ -0.89
SAMM50-204ENST00000493161 OR4D5Q8NGN0 318 aa9.49□□□□□ -0.89
SAMM50-204ENST00000493161 NOP10Q9NPE3 64 aaKnown RBP9.49□□□□□ -0.89
SAMM50-204ENST00000493161 SLC45A2Q9UMX9 530 aa9.49□□□□□ -0.89
SAMM50-204ENST00000493161 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 A0A0J9YY99 117 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 ANKRD20A5PA0PJZ0 165 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
SAMM50-204ENST00000493161 TAS2R60P59551 318 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 RAB11AP62491 216 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 MRPS10P82664 201 aaKnown RBP9.48□□□□□ -0.89
SAMM50-204ENST00000493161 OR5I1Q13606 314 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 ESRGQ1W209 222 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 Q9H3A6 140 aa9.48□□□□□ -0.89
SAMM50-204ENST00000493161 FAT1Q14517 4588 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 H3BRN7 92 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 CFDP00746 253 aaPredicted RBP9.47□□□□□ -0.89
SAMM50-204ENST00000493161 HOXA5P20719 270 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 RHOBP62745 196 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 IL18Q14116 193 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 BPIFCQ8NFQ6 507 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 OR8A1Q8NGG7 326 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
SAMM50-204ENST00000493161 GNPNAT1Q96EK6 184 aaPredicted RBP9.47□□□□□ -0.89
SAMM50-204ENST00000493161 C16orf74Q96GX8 76 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 GPR82Q96P67 336 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 TMEM147Q9BVK8 224 aa9.47□□□□□ -0.89
SAMM50-204ENST00000493161 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
SAMM50-204ENST00000493161 ZNF701M0R085 212 aaPredicted RBP9.46□□□□□ -0.9
SAMM50-204ENST00000493161 CTDSPLO15194 276 aa9.46□□□□□ -0.9
SAMM50-204ENST00000493161 CXCL3P19876 107 aa9.46□□□□□ -0.9
SAMM50-204ENST00000493161 SPCS2Q15005 226 aa9.46□□□□□ -0.9
SAMM50-204ENST00000493161 TMEM144Q7Z5S9 345 aa9.46□□□□□ -0.9
SAMM50-204ENST00000493161 PARD6GQ9BYG4 376 aaPredicted RBP9.46□□□□□ -0.9
SAMM50-204ENST00000493161 MCUBQ9NWR8 336 aa9.46□□□□□ -0.9
SAMM50-204ENST00000493161 ZNF586Q9NXT0 402 aa9.46□□□□□ -0.9
SAMM50-204ENST00000493161 SCP2D1Q9UJQ7 156 aa9.46□□□□□ -0.9
SAMM50-204ENST00000493161 EPM2AB3EWF7 344 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 WRBO00258 174 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 SMIM18P0DKX4 95 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 BTF3P20290 206 aaKnown RBP9.45□□□□□ -0.9
SAMM50-204ENST00000493161 SRPXP78539 464 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 AKR1C1Q04828 323 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 PSG3Q16557 428 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 TTC32Q5I0X7 151 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 TMEM256Q8N2U0 113 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 RXFP4Q8TDU9 374 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 DIRAS2Q96HU8 199 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 SHANK2-AS3Q9BTD1 123 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 PPP1R14DQ9NXH3 145 aa9.45□□□□□ -0.9
SAMM50-204ENST00000493161 H3BP45 60 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 SYNGR2O43760 224 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
SAMM50-204ENST00000493161 ANXA3P12429 323 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 M6PRP20645 277 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 SPANXN5Q5MJ07 72 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 ACOT7LQ6ZUV0 252 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 LINC00612Q8N6U2 182 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 TMEM263Q8WUH6 116 aaKnown RBP9.44□□□□□ -0.9
SAMM50-204ENST00000493161 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
SAMM50-204ENST00000493161 GAGE12BA1L429 117 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 GAGE7O76087 117 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 GAGE12FP0CL80 117 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 GAGE12GP0CL81 117 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 GAGE12IP0CL82 117 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 CDKN1BP46527 198 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 LINC00315P59091 139 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 ZNF493Q6ZR52 646 aa9.43□□□□□ -0.9
SAMM50-204ENST00000493161 Q6ZRN7 208 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms