RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SPP1P10451 314 aa7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 RPL7P18124 248 aaKnown RBP7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 BAXQ07812 192 aa7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 MORN3Q6PF18 240 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 PPP1R1CQ8WVI7 109 aa7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 SCRT1Q9BWW7 348 aa7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 OR5AC2Q9NZP5 309 aa7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 ALG5Q9Y673 324 aa7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 RYR3Q15413 4870 aa7.83□□□□□ -1.16
CDC42SE1-206ENST00000492796 ELOA3CA0A087WX78 387 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 KNCNA6PVL3 124 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 H0YIZ8 118 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 COX7A2P2O60397 106 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 MPDU1O75352 247 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 MPC2O95563 127 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 EWSR1Q01844 656 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 ACTL10Q5JWF8 245 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 Q6ZRG5 221 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 IL17DQ8TAD2 202 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 CHAC2Q8WUX2 184 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 UHRF2Q96PU4 802 aa7.82□□□□□ -1.16
CDC42SE1-206ENST00000492796 LYL1P12980 280 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 HLA-DRB4P13762 266 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 ATF4P18848 351 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 RPL29P47914 159 aaKnown RBP7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 NUTF2P61970 127 aaKnown RBP7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 PRR20EP86478 221 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 PRR20CP86479 221 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 PRR20DP86480 221 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 PRR20BP86481 221 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 PRR20AP86496 221 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 NHLH2Q02577 135 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 OPCMLQ14982 345 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 SPATA31B1PQ5VZV4 182 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 PATE2Q6UY27 113 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 FOXI2Q6ZQN5 318 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 LINC00305Q7Z4B0 112 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 OR5C1Q8NGR4 320 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 OR1L4Q8NGR5 311 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 PFDN5Q99471 154 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 RSG1Q9BU20 258 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 SAV1Q9H4B6 383 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 HLA-DRB4X5D2U9 266 aa7.81□□□□□ -1.16
CDC42SE1-206ENST00000492796 A0A087X0K7 114 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 H3BMM0 161 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 FGF7P21781 194 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 B2MP61769 119 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 RGS21Q2M5E4 152 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 CASC10Q5T4H9 136 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 C10orf113Q5VZT2 155 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 MIC13Q5XKP0 118 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 C17orf77Q96MU5 243 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 LINC00052Q96N35 136 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 C1QTNF4Q9BXJ3 329 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 MED28Q9H204 178 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 RPRMQ9NS64 109 aa7.8□□□□□ -1.16
CDC42SE1-206ENST00000492796 MRPS12O15235 138 aaKnown RBP7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 CXCL2P19875 107 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 C4BPBP20851 252 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 EBLN2Q6P2I7 272 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 BPIFA4PQ86YQ2 179 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 ASB13Q8WXK3 278 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 TMEM37Q8WXS4 190 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 CLUHP3Q96NS8 147 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 ATP5SQ99766 215 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 RARRES2Q99969 163 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 RNF126Q9BV68 326 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 NPCDR1Q9BY65 106 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 DNAJC4Q9NNZ3 241 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 KCNIP2Q9NS61 270 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 SLC39A9Q9NUM3 307 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 MBD2Q9UBB5 411 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 PXMP4Q9Y6I8 212 aa7.79□□□□□ -1.16
CDC42SE1-206ENST00000492796 CSMD3Q7Z407 3707 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 A0A0J9YWU9 116 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 GIG44P09565 113 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 CXCL3P19876 107 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 RPL12P30050 165 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 FGL1Q08830 312 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 CLINT1Q14677 625 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 GDF5OSQ5U4N7 250 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 LCN15Q6UWW0 184 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 OR11H2Q8NH07 326 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 THAP6Q8TBB0 222 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 WDR61Q9GZS3 305 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 C11orf68Q9H3H3 251 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 HSPB11Q9Y547 144 aa7.78□□□□□ -1.16
CDC42SE1-206ENST00000492796 AGRNO00468 2067 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 A0A0J9YX75 114 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 ZNF705EA8MWA4 302 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 C17orf112F2Z3M2 114 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 OXA1LQ15070 435 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 FCN2Q15485 313 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 ZNF709Q8N972 641 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 OR11H7Q8NGC8 314 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 LRRC20Q8TCA0 184 aa7.77□□□□□ -1.17
CDC42SE1-206ENST00000492796 C20orf173Q96LM9 149 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms