RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 SLC35E1Q96K37 410 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
TMEM39A-210ENST00000490099 PMS2P5A8MQ11 134 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 A8MTW9 85 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 ZNF705FA8MVS1 300 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 C11orf94C9JXX5 98 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 ZNF705DP0CH99 300 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 ZNF705BP0CI00 300 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 IAPPP10997 89 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 HLA-DRB4P13762 266 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 PSMB3P49720 205 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 S100A10P60903 97 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 ZNF705AQ6ZN79 300 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 TMEM182Q6ZP80 229 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 THAP6Q8TBB0 222 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 PPP1R1CQ8WVI7 109 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 ST6GAL2Q96JF0 529 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 NEU1Q99519 415 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 C1QTNF4Q9BXJ3 329 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 MAGT1Q9H0U3 335 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 FBXL17Q9UF56 701 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 HLA-DRB4X5D2U9 266 aa7.01□□□□□ -1.29
TMEM39A-210ENST00000490099 L7N2F9 121 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 ISLRO14498 428 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 MPC2O95563 127 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 MBPP02686 304 aaPredicted RBP7□□□□□ -1.29
TMEM39A-210ENST00000490099 H2AFB1P0C5Y9 115 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 PAX9P55771 341 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 NUTF2P61970 127 aaKnown RBP7□□□□□ -1.29
TMEM39A-210ENST00000490099 VAMP2P63027 116 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 RPP30P78346 268 aaKnown RBP7□□□□□ -1.29
TMEM39A-210ENST00000490099 IL15RAQ13261 267 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 OR2F1Q13607 317 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 RAB32Q13637 225 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 ZFP69Q49AA0 526 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 LRRC37A5PQ49AS3 106 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 GDF5OSQ5U4N7 250 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 SAMD13Q5VXD3 122 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 SPATA31B1PQ5VZV4 182 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 FOXI2Q6ZQN5 318 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 C2CD4CQ8TF44 421 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 SMIM8Q96KF7 97 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 SAV1Q9H4B6 383 aaPredicted RBP7□□□□□ -1.29
TMEM39A-210ENST00000490099 CLEC5AQ9NY25 188 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 APLNQ9ULZ1 77 aa7□□□□□ -1.29
TMEM39A-210ENST00000490099 LSM5Q9Y4Y9 91 aaKnown RBP7□□□□□ -1.29
TMEM39A-210ENST00000490099 VPS13DQ5THJ4 4388 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 E5RGE8 158 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 K7EPK0 472 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 DEDDO75618 318 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 C1QBP02746 253 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 HLA-DMBP28068 263 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 TAS2R30P59541 319 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 TMEM144Q7Z5S9 345 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 RPP25LQ8N5L8 163 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 ZNF709Q8N972 641 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 PBDC1Q9BVG4 233 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 XCL2Q9UBD3 114 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 RCL1Q9Y2P8 373 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
TMEM39A-210ENST00000490099 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 ZNF98A6NK75 572 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 FNDC10F2Z333 226 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 SSSCA1O60232 199 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 ID1P41134 155 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 MEOX2P50222 304 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 DEFB1P60022 68 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 PLP1P60201 277 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 LYZP61626 148 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 POLR2GP62487 172 aaKnown RBP eCLIP6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 C12orf74Q32Q52 190 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 SPANXN5Q5MJ07 72 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 TMEM14EPQ6UXP3 125 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 OR8I2Q8N0Y5 310 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 INO80EQ8NBZ0 244 aaPredicted RBP6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 HYLS1Q96M11 299 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 SLC25A32Q9H2D1 315 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 MBD2Q9UBB5 411 aa6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 STRAPQ9Y3F4 350 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-210ENST00000490099 FXYD6-FXYD2A0A087WZ82 144 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 TRAV10A0A0B4J240 114 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 A0A0J9YX75 114 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 HMSDA8MTL9 139 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 TSC22D2O75157 780 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 GATA2P23769 480 aaPredicted RBP6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 AMTNQ6UX39 209 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 Q6ZTC4 211 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 ACOT7LQ6ZUV0 252 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 STX12Q86Y82 276 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 BPIFCQ8NFQ6 507 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 GPR82Q96P67 336 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 RNF126Q9BV68 326 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 SLC25A31Q9H0C2 315 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 PSENENQ9NZ42 101 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
TMEM39A-210ENST00000490099 TRAV8-2A0A0B4J237 113 aa6.96□□□□□ -1.3
TMEM39A-210ENST00000490099 H3BP45 60 aa6.96□□□□□ -1.3
TMEM39A-210ENST00000490099 CAV2P51636 162 aa6.96□□□□□ -1.3
TMEM39A-210ENST00000490099 SELENOTP62341 195 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms