RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GPR132Q9UNW8 380 aa9.67□□□□□ -0.86
VARS-227ENST00000489979 TIMM8BQ9Y5J9 83 aaPredicted RBP9.67□□□□□ -0.86
VARS-227ENST00000489979 TRAV26-1A0A087WT03 109 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 ZNF182P17025 639 aaPredicted RBP9.66□□□□□ -0.86
VARS-227ENST00000489979 TAS2R60P59551 318 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 FGL1Q08830 312 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 ESRGQ1W209 222 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 TMEM256Q8N2U0 113 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 THAP8Q8NA92 274 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 ZNF738Q8NE65 137 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 OR1B1Q8NGR6 318 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 C16orf74Q96GX8 76 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 UPK3BQ9BT76 320 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 NOP10Q9NPE3 64 aaKnown RBP9.66□□□□□ -0.86
VARS-227ENST00000489979 ZNF586Q9NXT0 402 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 SLC45A2Q9UMX9 530 aa9.66□□□□□ -0.86
VARS-227ENST00000489979 A0A0J9YY99 117 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 DISC1C4P0D8 188 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 CFDP00746 253 aaPredicted RBP9.65□□□□□ -0.86
VARS-227ENST00000489979 ORM2P19652 201 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 RHOBP62745 196 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 GGNBP1Q5YKI7 109 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 LYZL2Q7Z4W2 148 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 TMEM144Q7Z5S9 345 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 OR4D5Q8NGN0 318 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 RXFP4Q8TDU9 374 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 FUNDC2Q9BWH2 189 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 KCNIP3Q9Y2W7 256 aa9.65□□□□□ -0.86
VARS-227ENST00000489979 A0A0B4J2A0 478 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 NOL3O60936 208 aaKnown RBP9.64□□□□□ -0.87
VARS-227ENST00000489979 M6PRP20645 277 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 GATA2P23769 480 aaPredicted RBP9.64□□□□□ -0.87
VARS-227ENST00000489979 FUSP35637 526 aaKnown RBP eCLIP9.64□□□□□ -0.87
VARS-227ENST00000489979 XGP55808 180 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 RAB11AP62491 216 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 HIST1H1AQ02539 215 aaPredicted RBP9.64□□□□□ -0.87
VARS-227ENST00000489979 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 OR1S1Q8NH92 325 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 C15orf40Q8WUR7 153 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 ZNF503Q96F45 646 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 GPR82Q96P67 336 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 PPP1R14DQ9NXH3 145 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 SHPKQ9UHJ6 478 aa9.64□□□□□ -0.87
VARS-227ENST00000489979 PAIP2BQ9ULR5 123 aaKnown RBP9.64□□□□□ -0.87
VARS-227ENST00000489979 MRPS16Q9Y3D3 137 aaKnown RBP9.64□□□□□ -0.87
VARS-227ENST00000489979 FLG2Q5D862 2391 aaPredicted RBP9.64□□□□□ -0.87
VARS-227ENST00000489979 PRB4P10163 310 aaPredicted RBP9.63□□□□□ -0.87
VARS-227ENST00000489979 IAPPP10997 89 aa9.63□□□□□ -0.87
VARS-227ENST00000489979 LINC00315P59091 139 aa9.63□□□□□ -0.87
VARS-227ENST00000489979 SSBP1Q04837 148 aaKnown RBP9.63□□□□□ -0.87
VARS-227ENST00000489979 Q5VSD8 79 aa9.63□□□□□ -0.87
VARS-227ENST00000489979 TMEM182Q6ZP80 229 aaPredicted RBP9.63□□□□□ -0.87
VARS-227ENST00000489979 ZNF493Q6ZR52 646 aa9.63□□□□□ -0.87
VARS-227ENST00000489979 BPIFCQ8NFQ6 507 aa9.63□□□□□ -0.87
VARS-227ENST00000489979 OR8A1Q8NGG7 326 aa9.63□□□□□ -0.87
VARS-227ENST00000489979 RNASE8Q8TDE3 154 aaKnown RBP9.63□□□□□ -0.87
VARS-227ENST00000489979 AP3S1Q92572 193 aa9.63□□□□□ -0.87
VARS-227ENST00000489979 TMEM147Q9BVK8 224 aa9.63□□□□□ -0.87
VARS-227ENST00000489979 ZNF701M0R085 212 aaPredicted RBP9.62□□□□□ -0.87
VARS-227ENST00000489979 SMIM18P0DKX4 95 aa9.62□□□□□ -0.87
VARS-227ENST00000489979 HOXA5P20719 270 aa9.62□□□□□ -0.87
VARS-227ENST00000489979 Q6ZRN7 208 aaPredicted RBP9.62□□□□□ -0.87
VARS-227ENST00000489979 TMEM263Q8WUH6 116 aaKnown RBP9.62□□□□□ -0.87
VARS-227ENST00000489979 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
VARS-227ENST00000489979 PTTG2Q9NZH5 202 aa9.62□□□□□ -0.87
VARS-227ENST00000489979 AKAIN1P0CW23 69 aa9.61□□□□□ -0.87
VARS-227ENST00000489979 AKR1C4P17516 323 aa9.61□□□□□ -0.87
VARS-227ENST00000489979 S100A7P31151 101 aa9.61□□□□□ -0.87
VARS-227ENST00000489979 LINC00612Q8N6U2 182 aa9.61□□□□□ -0.87
VARS-227ENST00000489979 OR51S1Q8NGJ8 323 aa9.61□□□□□ -0.87
VARS-227ENST00000489979 FRZBQ92765 325 aa9.61□□□□□ -0.87
VARS-227ENST00000489979 PRRT1Q99946 306 aa9.61□□□□□ -0.87
VARS-227ENST00000489979 H3BRN7 92 aa9.6□□□□□ -0.87
VARS-227ENST00000489979 H7BYZ3 331 aa9.6□□□□□ -0.87
VARS-227ENST00000489979 PITX3O75364 302 aa9.6□□□□□ -0.87
VARS-227ENST00000489979 ADAP1O75689 374 aa9.6□□□□□ -0.87
VARS-227ENST00000489979 CXCL3P19876 107 aa9.6□□□□□ -0.87
VARS-227ENST00000489979 CDKN1BP46527 198 aa9.6□□□□□ -0.87
VARS-227ENST00000489979 PSG3Q16557 428 aa9.6□□□□□ -0.87
VARS-227ENST00000489979 CLVS1Q8IUQ0 354 aaPredicted RBP9.6□□□□□ -0.87
VARS-227ENST00000489979 MIXL1Q9H2W2 232 aa9.6□□□□□ -0.87
VARS-227ENST00000489979 GAGE12BA1L429 117 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 PRSS46E5RG02 174 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 H3BNG1 76 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 EREGO14944 169 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 GAGE7O76087 117 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 RPL7P18124 248 aaKnown RBP9.59□□□□□ -0.87
VARS-227ENST00000489979 MRPS10P82664 201 aaKnown RBP9.59□□□□□ -0.87
VARS-227ENST00000489979 KIR3DS1Q14943 382 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 SMIM4Q8WVI0 70 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 SHANK2-AS3Q9BTD1 123 aa9.59□□□□□ -0.87
VARS-227ENST00000489979 RLN2P04090 185 aa9.58□□□□□ -0.88
VARS-227ENST00000489979 ANXA3P12429 323 aa9.58□□□□□ -0.88
VARS-227ENST00000489979 SRPXP78539 464 aa9.58□□□□□ -0.88
VARS-227ENST00000489979 AKR1C1Q04828 323 aa9.58□□□□□ -0.88
VARS-227ENST00000489979 CDPF1Q6NVV7 123 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms