RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 FAAP20Q6NZ36 180 aa13.25□□□□□ -0.29
CHRD-216ENST00000486066 PGPEP1Q9NXJ5 209 aa13.25□□□□□ -0.29
CHRD-216ENST00000486066 ZNF586Q9NXT0 402 aa13.25□□□□□ -0.29
CHRD-216ENST00000486066 C14orf166Q9Y224 244 aaKnown RBP13.25□□□□□ -0.29
CHRD-216ENST00000486066 PRSS46E5RG02 174 aa13.24□□□□□ -0.29
CHRD-216ENST00000486066 H3BNG1 76 aa13.24□□□□□ -0.29
CHRD-216ENST00000486066 TNFAIP8O95379 198 aa13.24□□□□□ -0.29
CHRD-216ENST00000486066 CCR6P51684 374 aa13.24□□□□□ -0.29
CHRD-216ENST00000486066 TMEM182Q6ZP80 229 aaPredicted RBP13.24□□□□□ -0.29
CHRD-216ENST00000486066 RNF182Q8N6D2 247 aa13.24□□□□□ -0.29
CHRD-216ENST00000486066 PPP1R14BQ96C90 147 aa13.24□□□□□ -0.29
CHRD-216ENST00000486066 GNPNAT1Q96EK6 184 aaPredicted RBP13.24□□□□□ -0.29
CHRD-216ENST00000486066 SLC25A39Q9BZJ4 359 aaPredicted RBP13.24□□□□□ -0.29
CHRD-216ENST00000486066 GABARAPH6UMI1 98 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 ZNF701M0R085 212 aaPredicted RBP13.23□□□□□ -0.29
CHRD-216ENST00000486066 GABARAPO95166 117 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 CFDP00746 253 aaPredicted RBP13.23□□□□□ -0.29
CHRD-216ENST00000486066 M6PRP20645 277 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 DLK1P80370 383 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 CDPF1Q6NVV7 123 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 ZNF493Q6ZR52 646 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 OR1B1Q8NGR6 318 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 TMEM263Q8WUH6 116 aaKnown RBP13.23□□□□□ -0.29
CHRD-216ENST00000486066 GPR82Q96P67 336 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 NOP10Q9NPE3 64 aaKnown RBP13.23□□□□□ -0.29
CHRD-216ENST00000486066 PRR13Q9NZ81 148 aa13.23□□□□□ -0.29
CHRD-216ENST00000486066 LRP1Q07954 4544 aaKnown RBP13.23□□□□□ -0.29
CHRD-216ENST00000486066 A0A0B4J2A0 478 aa13.22□□□□□ -0.29
CHRD-216ENST00000486066 FUSP35637 526 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHRD-216ENST00000486066 LINC01587Q99440 93 aa13.22□□□□□ -0.29
CHRD-216ENST00000486066 SLC25A22Q9H936 323 aa13.22□□□□□ -0.29
CHRD-216ENST00000486066 SHPKQ9UHJ6 478 aa13.22□□□□□ -0.29
CHRD-216ENST00000486066 FAT3Q8TDW7 4589 aa13.21□□□□□ -0.29
CHRD-216ENST00000486066 PITX3O75364 302 aa13.21□□□□□ -0.29
CHRD-216ENST00000486066 VBP1P61758 197 aa13.21□□□□□ -0.29
CHRD-216ENST00000486066 SSBP1Q04837 148 aaKnown RBP13.21□□□□□ -0.29
CHRD-216ENST00000486066 LYZL2Q7Z4W2 148 aa13.21□□□□□ -0.29
CHRD-216ENST00000486066 TMEM144Q7Z5S9 345 aa13.21□□□□□ -0.29
CHRD-216ENST00000486066 OR8A1Q8NGG7 326 aa13.21□□□□□ -0.29
CHRD-216ENST00000486066 EXTL2Q9UBQ6 330 aa13.21□□□□□ -0.29
CHRD-216ENST00000486066 ATP6V1G2O95670 118 aa13.2□□□□□ -0.3
CHRD-216ENST00000486066 KRTAP10-1P60331 282 aa13.2□□□□□ -0.3
CHRD-216ENST00000486066 GGNBP1Q5YKI7 109 aa13.2□□□□□ -0.3
CHRD-216ENST00000486066 OR10J6PQ8NGY7 276 aa13.2□□□□□ -0.3
CHRD-216ENST00000486066 FAM25AB3EWG3 89 aa13.19□□□□□ -0.3
CHRD-216ENST00000486066 FAM25CB3EWG5 89 aa13.19□□□□□ -0.3
CHRD-216ENST00000486066 FAM25GB3EWG6 89 aa13.19□□□□□ -0.3
CHRD-216ENST00000486066 H3BRN7 92 aa13.19□□□□□ -0.3
CHRD-216ENST00000486066 GATA2P23769 480 aaPredicted RBP13.19□□□□□ -0.3
CHRD-216ENST00000486066 OR5I1Q13606 314 aa13.19□□□□□ -0.3
CHRD-216ENST00000486066 FRZBQ92765 325 aa13.19□□□□□ -0.3
CHRD-216ENST00000486066 FUNDC2Q9BWH2 189 aa13.19□□□□□ -0.3
CHRD-216ENST00000486066 A0A0J9YY99 117 aa13.18□□□□□ -0.3
CHRD-216ENST00000486066 CXCL3P19876 107 aa13.18□□□□□ -0.3
CHRD-216ENST00000486066 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
CHRD-216ENST00000486066 A0A087X0K7 114 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 A0A096LPF7 62 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 H7BYZ3 331 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 ZNF182P17025 639 aaPredicted RBP13.17□□□□□ -0.3
CHRD-216ENST00000486066 CDKN1BP46527 198 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 KIR3DS1Q14943 382 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 MZT2AQ6P582 158 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 C15orf40Q8WUR7 153 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 VSIG2Q96IQ7 327 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 MIXL1Q9H2W2 232 aa13.17□□□□□ -0.3
CHRD-216ENST00000486066 ORM2P19652 201 aa13.16□□□□□ -0.3
CHRD-216ENST00000486066 HIST1H1AQ02539 215 aaPredicted RBP13.16□□□□□ -0.3
CHRD-216ENST00000486066 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
CHRD-216ENST00000486066 C20orf144Q9BQM9 153 aa13.16□□□□□ -0.3
CHRD-216ENST00000486066 SHANK2-AS3Q9BTD1 123 aa13.16□□□□□ -0.3
CHRD-216ENST00000486066 DISC1C4P0D8 188 aa13.15□□□□□ -0.3
CHRD-216ENST00000486066 MRPS12O15235 138 aaKnown RBP13.15□□□□□ -0.3
CHRD-216ENST00000486066 HTN1P15515 57 aa13.15□□□□□ -0.3
CHRD-216ENST00000486066 RAB11AP62491 216 aa13.15□□□□□ -0.3
CHRD-216ENST00000486066 PSG3Q16557 428 aa13.15□□□□□ -0.3
CHRD-216ENST00000486066 OR1S1Q8NH92 325 aa13.15□□□□□ -0.3
CHRD-216ENST00000486066 SMIM4Q8WVI0 70 aa13.15□□□□□ -0.3
CHRD-216ENST00000486066 C18orf15Q96N68 181 aa13.15□□□□□ -0.3
CHRD-216ENST00000486066 KCNIP3Q9Y2W7 256 aa13.15□□□□□ -0.3
CHRD-216ENST00000486066 ADAP1O75689 374 aa13.14□□□□□ -0.31
CHRD-216ENST00000486066 ERVFC1-1P60608 527 aa13.14□□□□□ -0.31
CHRD-216ENST00000486066 MRPS10P82664 201 aaKnown RBP13.14□□□□□ -0.31
CHRD-216ENST00000486066 OR51S1Q8NGJ8 323 aa13.14□□□□□ -0.31
CHRD-216ENST00000486066 PRRT1Q99946 306 aa13.14□□□□□ -0.31
CHRD-216ENST00000486066 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
CHRD-216ENST00000486066 PTTG2Q9NZH5 202 aa13.14□□□□□ -0.31
CHRD-216ENST00000486066 A0A087WXM4 84 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 AKAIN1P0CW23 69 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 IAPPP10997 89 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 AKR1C4P17516 323 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 PLP1P60201 277 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 RHOBP62745 196 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 AP3S1Q92572 193 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 TMPRSS5Q9H3S3 457 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 MDFICQ9P1T7 246 aa13.13□□□□□ -0.31
CHRD-216ENST00000486066 A0A087WTM6 91 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 GAGE12BA1L429 117 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 SIVA1O15304 175 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 GAGE7O76087 117 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 511 ms