RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	IGHV3-48	P01763	117 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	IGLC2	P0DOY2	106 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	ID1	P41134	155 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	APOC4	P55056	127 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	CD81	P60033	236 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	LYZ	P61626	148 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	EIF5A	P63241	154 aa	Known RBP	3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	NHLH2	Q02577	135 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	C10orf113	Q5VZT2	155 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	OR8I2	Q8N0Y5	310 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	TMEM217	Q8N7C4	229 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	ZNF709	Q8N972	641 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	OR2T35	Q8NGX2	323 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	TMEM37	Q8WXS4	190 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	ODF3	Q96PU9	254 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	SPATA25	Q9BR10	227 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	C1QTNF4	Q9BXJ3	329 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	MAP6D1	Q9H9H5	199 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	PRELID1	Q9Y255	219 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	PXMP4	Q9Y6I8	212 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	ARL2-SNX15	V9GYD0	113 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	TENM3	Q9P273	2699 aa		3.78	□□□□□ -1.8
HDAC6-223	ENST00000480525	DNAH9	Q9NYC9	4486 aa		3.78	□□□□□ -1.81
HDAC6-223	ENST00000480525	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	UBE2L5P	A0A1B0GUS4	154 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	SMCO3	A2RU48	225 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	DNASE2	O00115	360 aa	Predicted RBP	3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	COX7A2P2	O60397	106 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	APOH	P02749	345 aa	Predicted RBP	3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	AMBP	P02760	352 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	NMB	P08949	121 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	CD7	P09564	240 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	FRMD6-AS1	P0C7T7	363 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	M6PR	P20645	277 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	FGF7	P21781	194 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	TAS2R45	P59539	299 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	NUTF2	P61970	127 aa	Known RBP	3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	LRRC37A5P	Q49AS3	106 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	PATE2	Q6UY27	113 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	PQLC2	Q6ZP29	291 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	TMEM182	Q6ZP80	229 aa	Predicted RBP	3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	FOXI2	Q6ZQN5	318 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	LINC00305	Q7Z4B0	112 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	TRPT1	Q86TN4	253 aa	Known RBP	3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	KCNRG	Q8N5I3	272 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	STOML3	Q8TAV4	291 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	SUN5	Q8TC36	379 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	PRR25	Q96S07	402 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	C20orf144	Q9BQM9	153 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	TCEAL7	Q9BRU2	100 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	ARL6	Q9H0F7	186 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	SAV1	Q9H4B6	383 aa	Predicted RBP	3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	RPRM	Q9NS64	109 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	PPP1R14D	Q9NXH3	145 aa		3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	PAIP2B	Q9ULR5	123 aa	Known RBP	3.77	□□□□□ -1.81
HDAC6-223	ENST00000480525	NBEAL2	Q6ZNJ1	2754 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	SERTM2	A0A1B0GWG4	89 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	RBAKDN	A6NC62	111 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	FBLL1	A6NHQ2	334 aa	Known RBP	3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	UMAD1	C9J7I0	102 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	C1QB	P02746	253 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	SLC25A5	P05141	298 aa	Known RBP	3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	SEC11B	P0C7V7	166 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	HIST1H1E	P10412	219 aa	Known RBP	3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	HLA-DRB4	P13762	266 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	ORM2	P19652	201 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	EDN2	P20800	178 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	C4BPB	P20851	252 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	RHOB	P62745	196 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	PSG9	Q00887	426 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	GUCA2B	Q16661	112 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	KHDC3L	Q587J8	217 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	DPPA3	Q6W0C5	159 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	SCGB1C1	Q8TD33	95 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	TMED6	Q8WW62	240 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	SAT2	Q96F10	170 aa	Predicted RBP	3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	ST6GAL2	Q96JF0	529 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	HYLS1	Q96M11	299 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	C17orf77	Q96MU5	243 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	NEU1	Q99519	415 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	PBDC1	Q9BVG4	233 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	NKX6-2	Q9C056	277 aa	Predicted RBP	3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	SLC25A32	Q9H2D1	315 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	TUBA4B	Q9H853	241 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	ZMAT4	Q9H898	229 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	SRD5A3	Q9H8P0	318 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	FUT9	Q9Y231	359 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	LENEP	Q9Y5L5	61 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	HLA-DRB4	X5D2U9	266 aa		3.76	□□□□□ -1.81
HDAC6-223	ENST00000480525	TRBV19	A0A075B6N1	114 aa		3.75	□□□□□ -1.81
HDAC6-223	ENST00000480525		A0A0J9YX75	114 aa		3.75	□□□□□ -1.81
HDAC6-223	ENST00000480525	SMIM9	A6NGZ8	99 aa		3.75	□□□□□ -1.81
HDAC6-223	ENST00000480525	ZNF705E	A8MWA4	302 aa	Predicted RBP	3.75	□□□□□ -1.81
HDAC6-223	ENST00000480525		H3BMM0	161 aa		3.75	□□□□□ -1.81
HDAC6-223	ENST00000480525	ZNF207	O43670	478 aa	Known RBP	3.75	□□□□□ -1.81
HDAC6-223	ENST00000480525	DUSP14	O95147	198 aa	Known RBP	3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms