RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 ETDBQ3ZM63 59 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 TMEM52BQ4KMG9 183 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 CENPWQ5EE01 88 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 CLLU1OSQ5K130 101 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 UTF1Q5T230 341 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 RHBDD2Q6NTF9 364 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 AMTNQ6UX39 209 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 ZNF818PQ6ZRF7 136 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 C2orf91Q6ZV80 131 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 PDPNQ86YL7 162 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 MKXQ8IYA7 352 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 CEND1Q8N111 149 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 C2orf73Q8N5S3 287 aaPredicted RBP3.18□□□□□ -1.9
CMSS1-204ENST00000479555 BCORP1Q8N888 145 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 OR11H6Q8NGC7 330 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 ZNRF2Q8NHG8 242 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 CT55Q8WUE5 264 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 LRRC29Q8WV35 223 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 COPS9Q8WXC6 57 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 TM4SF19Q96DZ7 209 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 COX14Q96I36 57 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 VSTM2LQ96N03 204 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 RTL8AQ9BWD3 113 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 PHPT1Q9NRX4 125 aaPredicted RBP3.18□□□□□ -1.9
CMSS1-204ENST00000479555 B4GALT7Q9UBV7 327 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 LHFPL6Q9Y693 200 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 CHD3Q12873 2000 aaKnown RBP3.18□□□□□ -1.9
CMSS1-204ENST00000479555 DOCK6Q96HP0 2047 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 COL4A2P08572 1712 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 PIKFYVEQ9Y2I7 2098 aa3.18□□□□□ -1.9
CMSS1-204ENST00000479555 SCN3AQ9NY46 2000 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 MDC1Q14676 2089 aaKnown RBP3.17□□□□□ -1.9
CMSS1-204ENST00000479555 IGHV4-4A0A075B6R2 117 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 FAM240AA0A1B0GVK7 77 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 LINC01549A6NIU2 74 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 NCBP2LA6PVI3 153 aaKnown RBP3.17□□□□□ -1.9
CMSS1-204ENST00000479555 IGLL5B9A064 214 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 H3BP45 60 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 H3BSH0 61 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 OR2H2O95918 312 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 NGFP01138 241 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 IGKV1D-33P01593 117 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 IGKV1-33P01594 117 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 ORM1P02763 201 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 SLC25A5P05141 298 aaKnown RBP3.17□□□□□ -1.9
CMSS1-204ENST00000479555 ARL14EPLP0DKL9 152 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 IAPPP10997 89 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 NPPCP23582 126 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 GATA2P23769 480 aaPredicted RBP3.17□□□□□ -1.9
CMSS1-204ENST00000479555 RBM11P57052 281 aaKnown RBP3.17□□□□□ -1.9
CMSS1-204ENST00000479555 DSCR10P59022 87 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 RPL8P62917 257 aaKnown RBP3.17□□□□□ -1.9
CMSS1-204ENST00000479555 IGLV3-21P80748 117 aaPredicted RBP3.17□□□□□ -1.9
CMSS1-204ENST00000479555 TNFAIP6P98066 277 aaPredicted RBP3.17□□□□□ -1.9
CMSS1-204ENST00000479555 RRN3P1Q2M238 152 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 TSPO2Q5TGU0 170 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 LCN12Q6JVE5 192 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 NOTCH2NLQ7Z3S9 236 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 PIGCQ92535 297 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 IFI27L1Q96BM0 104 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 ZNF414Q96IQ9 312 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 PRELID3AQ96N28 172 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 RASL11BQ9BPW5 248 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 FBXL15Q9H469 300 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 PRTFDC1Q9NRG1 225 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 IDI2-AS1Q9NZ38 188 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 ZNF492Q9P255 531 aa3.17□□□□□ -1.9
CMSS1-204ENST00000479555 TMEM131Q92545 1883 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 DOCK3Q8IZD9 2030 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 TRBV20OR9-2A0A075B6H5 130 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 TMED7-TICAM2A0A0A6YYA0 188 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 TRGV8A0A0C4DH27 118 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 IGKV1-8A0A0C4DH67 115 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 IGKV1-9A0A0C4DH69 117 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 ZNF816-ZNF321PA0A0X1KG74 233 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 SPAARA0A1B0GVQ0 90 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 A0A1B0GXF2 115 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 TMEM150CB9EJG8 249 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 F2Z2F3 143 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 K7EN84 100 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 UQCRQO14949 82 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 CEACAM4O75871 244 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 NCR2O95944 276 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 HBDP02042 147 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 P04436 131 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 SCTP09683 121 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 FGF6P10767 208 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 FCGR2BP31994 310 aaPredicted RBP3.16□□□□□ -1.9
CMSS1-204ENST00000479555 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
CMSS1-204ENST00000479555 ID1P41134 155 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 RPS27P42677 84 aaKnown RBP3.16□□□□□ -1.9
CMSS1-204ENST00000479555 PCBD1P61457 104 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 OR1C1Q15619 314 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 DEFB134Q4QY38 66 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 ZNF542PQ5EBM4 170 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 KLF17Q5JT82 389 aaPredicted RBP3.16□□□□□ -1.9
CMSS1-204ENST00000479555 CFAP126Q5VTH2 177 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 SPATA31B1PQ5VZV4 182 aa3.16□□□□□ -1.9
CMSS1-204ENST00000479555 ZNF841Q6ZN19 808 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms