RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ISLRO14498 428 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 HLA-DRB4P13762 266 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 MEOX2P50222 304 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 FGL1Q08830 312 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 STX12Q86Y82 276 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 C20orf173Q96LM9 149 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 ARV1Q9H2C2 271 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 UQCC1Q9NVA1 299 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 HLA-DRB4X5D2U9 266 aa16.57■□□□□ 0.24
TRAF4-211ENST00000478021 UBE2L5PA0A1B0GUS4 154 aa16.56■□□□□ 0.24
TRAF4-211ENST00000478021 DEFB4AO15263 64 aa16.56■□□□□ 0.24
TRAF4-211ENST00000478021 SSNA1O43805 119 aa16.56■□□□□ 0.24
TRAF4-211ENST00000478021 NMES1Q9C002 83 aa16.56■□□□□ 0.24
TRAF4-211ENST00000478021 SAV1Q9H4B6 383 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-211ENST00000478021 CXorf65A6NEN9 183 aa16.55■□□□□ 0.24
TRAF4-211ENST00000478021 F6UB75 175 aa16.55■□□□□ 0.24
TRAF4-211ENST00000478021 ATF4P18848 351 aaPredicted RBP16.55■□□□□ 0.24
TRAF4-211ENST00000478021 CAMLGP49069 296 aa16.55■□□□□ 0.24
TRAF4-211ENST00000478021 TMEM41BQ5BJD5 291 aa16.55■□□□□ 0.24
TRAF4-211ENST00000478021 IGFL4Q6B9Z1 124 aa16.55■□□□□ 0.24
TRAF4-211ENST00000478021 FOXI2Q6ZQN5 318 aa16.55■□□□□ 0.24
TRAF4-211ENST00000478021 OR5AC2Q9NZP5 309 aa16.55■□□□□ 0.24
TRAF4-211ENST00000478021 WDR83OSQ9Y284 106 aa16.55■□□□□ 0.24
TRAF4-211ENST00000478021 RLN2P04090 185 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 S100A11P31949 105 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 H2BFSP57053 126 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 FXYD7P58549 80 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 HBG1P69891 147 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 HBG2P69892 147 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 BAXQ07812 192 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 VWC2Q2TAL6 325 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 MIC13Q5XKP0 118 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 XCL2Q9UBD3 114 aa16.54■□□□□ 0.24
TRAF4-211ENST00000478021 H0YIZ8 118 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 COX7A2P2O60397 106 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 RPL7P18124 248 aaKnown RBP16.53■□□□□ 0.24
TRAF4-211ENST00000478021 NUTF2P61970 127 aaKnown RBP16.53■□□□□ 0.24
TRAF4-211ENST00000478021 RAB31Q13636 194 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 PXDC1Q5TGL8 231 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 SAMD13Q5VXD3 122 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 LINC00305Q7Z4B0 112 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 CSNK1G2-AS1Q8NCQ2 148 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 OR4B1Q8NGF8 309 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 RPRMQ9NS64 109 aa16.53■□□□□ 0.24
TRAF4-211ENST00000478021 CYCSP99999 105 aaKnown RBP16.52■□□□□ 0.24
TRAF4-211ENST00000478021 NHLH2Q02577 135 aa16.52■□□□□ 0.24
TRAF4-211ENST00000478021 EBLN2Q6P2I7 272 aa16.52■□□□□ 0.24
TRAF4-211ENST00000478021 S100A7AQ86SG5 101 aa16.52■□□□□ 0.24
TRAF4-211ENST00000478021 RNF182Q8N6D2 247 aa16.52■□□□□ 0.24
TRAF4-211ENST00000478021 C11orf68Q9H3H3 251 aaKnown RBP16.52■□□□□ 0.24
TRAF4-211ENST00000478021 TRAV8-2A0A0B4J237 113 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 A0A0J9YX75 114 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 E5RGE8 158 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 FGF7P21781 194 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 MORN5Q5VZ52 161 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 C10orf113Q5VZT2 155 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 Q8NAQ8 132 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 TMEM37Q8WXS4 190 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 SACSQ9NZJ4 4579 aa16.51■□□□□ 0.23
TRAF4-211ENST00000478021 IGHV4-28A0A0C4DH34 117 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 LCE6AA0A183 80 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 ZNF705EA8MWA4 302 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-211ENST00000478021 SNRPCP09234 159 aaKnown RBP16.5■□□□□ 0.23
TRAF4-211ENST00000478021 PRR20EP86478 221 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 PRR20CP86479 221 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 PRR20DP86480 221 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 PRR20BP86481 221 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 PRR20AP86496 221 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 ATP6V1FQ16864 119 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 FAM78BQ5VT40 261 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 PPP1R1CQ8WVI7 109 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 C1QTNF4Q9BXJ3 329 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 X6R8D5 127 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 RYR2Q92736 4967 aa16.5■□□□□ 0.23
TRAF4-211ENST00000478021 MRPS12O15235 138 aaKnown RBP16.49■□□□□ 0.23
TRAF4-211ENST00000478021 HLA-DMBP28068 263 aa16.49■□□□□ 0.23
TRAF4-211ENST00000478021 OPCMLQ14982 345 aa16.49■□□□□ 0.23
TRAF4-211ENST00000478021 Q6ZRG5 221 aa16.49■□□□□ 0.23
TRAF4-211ENST00000478021 OR5C1Q8NGR4 320 aa16.49■□□□□ 0.23
TRAF4-211ENST00000478021 SLC25A31Q9H0C2 315 aa16.49■□□□□ 0.23
TRAF4-211ENST00000478021 SLC35B3Q9H1N7 401 aa16.49■□□□□ 0.23
TRAF4-211ENST00000478021 TENM2Q9NT68 2774 aa16.49■□□□□ 0.23
TRAF4-211ENST00000478021 ELOA3CA0A087WX78 387 aaPredicted RBP16.48■□□□□ 0.23
TRAF4-211ENST00000478021 A0A087X0K7 114 aa16.48■□□□□ 0.23
TRAF4-211ENST00000478021 RBMY1A1P0DJD3 496 aaKnown RBP16.48■□□□□ 0.23
TRAF4-211ENST00000478021 RBMY1CP0DJD4 496 aa16.48■□□□□ 0.23
TRAF4-211ENST00000478021 PRB4P10163 310 aaPredicted RBP16.48■□□□□ 0.23
TRAF4-211ENST00000478021 NANOS2P60321 138 aaKnown RBP16.48■□□□□ 0.23
TRAF4-211ENST00000478021 B2MP61769 119 aa16.48■□□□□ 0.23
TRAF4-211ENST00000478021 RBMY1FQ15415 496 aaKnown RBP16.48■□□□□ 0.23
TRAF4-211ENST00000478021 SPATA31B1PQ5VZV4 182 aa16.48■□□□□ 0.23
TRAF4-211ENST00000478021 ZNF709Q8N972 641 aa16.48■□□□□ 0.23
TRAF4-211ENST00000478021 SLC39A9Q9NUM3 307 aa16.48■□□□□ 0.23
TRAF4-211ENST00000478021 ALG5Q9Y673 324 aa16.48■□□□□ 0.23
TRAF4-211ENST00000478021 LYSTQ99698 3801 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 ZNF705DP0CH99 300 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-211ENST00000478021 ZNF705BP0CI00 300 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-211ENST00000478021 MIFP14174 115 aa16.47■□□□□ 0.23
TRAF4-211ENST00000478021 RPL29P47914 159 aaKnown RBP16.47■□□□□ 0.23
TRAF4-211ENST00000478021 CLINT1Q14677 625 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms