RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 CXCL2P19875 107 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 P2RY1P47900 373 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 VAMP2P63027 116 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 AKR1C1Q04828 323 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 ODF3L2Q3SX64 289 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 LINC00322Q6ZN03 302 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-208ENST00000476739 WFDC3Q8IUB2 231 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 FAM24BQ8N5W8 94 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 RNF125Q96EQ8 232 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 PBDC1Q9BVG4 233 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 MS4A6AQ9H2W1 248 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 SRD5A3Q9H8P0 318 aa7.22□□□□□ -1.25
HDAC3-208ENST00000476739 IGSF23A1L1A6 192 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 TSTD3H0UI37 97 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 H0YIZ8 118 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 BUB3O43684 328 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 CST7O76096 145 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 CAV2P51636 162 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 LYZP61626 148 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 DLK1P80370 383 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 LRRC37A5PQ49AS3 106 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 EIF5AL1Q6IS14 154 aaKnown RBP7.21□□□□□ -1.26
HDAC3-208ENST00000476739 ATRAIDQ6UW56 229 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 C16orf54Q6UWD8 224 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 TMEM144Q7Z5S9 345 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 OR10P1Q8NGE3 313 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 GLMPQ8WWB7 406 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 NMES1Q9C002 83 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 RABAC1Q9UI14 185 aa7.21□□□□□ -1.26
HDAC3-208ENST00000476739 A0A1W2PS18 150 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 OR4C46A6NHA9 309 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 G3V3Q6 166 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 DEDDO75618 318 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 S100A2P29034 98 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 PKIAP61925 76 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 SNRPEP62304 92 aaKnown RBP7.2□□□□□ -1.26
HDAC3-208ENST00000476739 RPL11P62913 178 aaKnown RBP7.2□□□□□ -1.26
HDAC3-208ENST00000476739 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 HAGHQ16775 308 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 ALKAL2Q6UX46 152 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 CYP2G1PQ6ZSU1 146 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 APRG1Q8IVJ8 170 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 TMEM252Q8N6L7 170 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 TMEM217Q8N7C4 229 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 MFFQ9GZY8 342 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 LYRM2Q9NU23 88 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-208ENST00000476739 OR5AC2Q9NZP5 309 aa7.2□□□□□ -1.26
HDAC3-208ENST00000476739 NHLRC4P0CG21 123 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-208ENST00000476739 BMI1P35226 326 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 SLC38A11Q08AI6 406 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 COTL1Q14019 142 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 MRPL52Q86TS9 123 aaKnown RBP7.19□□□□□ -1.26
HDAC3-208ENST00000476739 KCNRGQ8N5I3 272 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 STXBP6Q8NFX7 210 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 STOML3Q8TAV4 291 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 RXFP4Q8TDU9 374 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 DCANP1Q8TF63 244 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 SAT2Q96F10 170 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-208ENST00000476739 NEU1Q99519 415 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 TM2D3Q9BRN9 247 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 TMEM231Q9H6L2 316 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 NPVFQ9HCQ7 196 aa7.19□□□□□ -1.26
HDAC3-208ENST00000476739 FNDC10F2Z333 226 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 K7EQG2 157 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 NDUFS6O75380 124 aaKnown RBP7.18□□□□□ -1.26
HDAC3-208ENST00000476739 CD5P06127 495 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 ORM2P19652 201 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 SULT1A1P50225 295 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 PAFAH1B2P68402 229 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 NHLH2Q02577 135 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 LEMD1Q68G75 181 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 TEPPQ6URK8 271 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 OR1B1Q8NGR6 318 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 RNF141Q8WVD5 230 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 PPP1R1CQ8WVI7 109 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 GRAMD2BQ96HH9 432 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 MGST2Q99735 147 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 RNF126Q9BV68 326 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 GGACTQ9BVM4 153 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 RETNQ9HD89 108 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 DOK5Q9P104 306 aa7.18□□□□□ -1.26
HDAC3-208ENST00000476739 COL7A1Q02388 2944 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-208ENST00000476739 COLCA2A8K830 154 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 AGPAT2O15120 278 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 TCAPO15273 167 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 ARPC5O15511 151 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 BCL2L11O43521 198 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 LINC00869P0C866 280 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 DEFB131AP59861 70 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 CYCSP99999 105 aaKnown RBP7.17□□□□□ -1.26
HDAC3-208ENST00000476739 FABP9Q0Z7S8 132 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 VWC2Q2TAL6 325 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 PATE2Q6UY27 113 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 SIGLEC15Q6ZMC9 328 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 SVIPQ8NHG7 77 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 PCNPQ8WW12 178 aaKnown RBP7.17□□□□□ -1.26
HDAC3-208ENST00000476739 C17orf77Q96MU5 243 aa7.17□□□□□ -1.26
HDAC3-208ENST00000476739 RCHY1Q96PM5 261 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms