RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 C1QTNF9P0C862 333 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 ERVK11-1P61568 191 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 Q9H3A6 140 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 PSG1P11464 419 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 RHOGP84095 191 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 OSTCQ9NRP0 149 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 PLSCR4Q9NRQ2 329 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 MYO15AQ9UKN7 3530 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 A0A0G2JRQ6 117 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 IGKCP01834 107 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 ATP5G3P48201 142 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 HAPLN4Q86UW8 402 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 PLEKHB2Q96CS7 222 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 OVOL2Q9BRP0 275 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 PLA2G2FQ9BZM2 168 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 PNRC2Q9NPJ4 139 aaKnown RBP9.56□□□□□ -0.88
U2AF1-209ENST00000475639 TNCP24821 2201 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 IGHV3OR16-10A0A075B7F0 116 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 ZNRF1Q8ND25 227 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 OTORQ9NRC9 128 aa9.56□□□□□ -0.88
U2AF1-209ENST00000475639 S4R3C0 116 aa9.55□□□□□ -0.88
U2AF1-209ENST00000475639 CLEC19AQ6UXS0 136 aa9.55□□□□□ -0.88
U2AF1-209ENST00000475639 ZNF501Q96CX3 271 aaPredicted RBP9.55□□□□□ -0.88
U2AF1-209ENST00000475639 IGHV3OR16-8A0A075B7F1 116 aa9.55□□□□□ -0.88
U2AF1-209ENST00000475639 ZNF114Q8NC26 417 aa9.55□□□□□ -0.88
U2AF1-209ENST00000475639 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
U2AF1-209ENST00000475639 TM4SF5O14894 197 aa9.55□□□□□ -0.88
U2AF1-209ENST00000475639 ZIC4Q8N9L1 334 aa9.55□□□□□ -0.88
U2AF1-209ENST00000475639 OR13A1Q8NGR1 328 aa9.55□□□□□ -0.88
U2AF1-209ENST00000475639 IGHV2-26A0A0B4J1V2 119 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 IGLC7A0M8Q6 106 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 RSPO4Q2I0M5 234 aaPredicted RBP9.54□□□□□ -0.88
U2AF1-209ENST00000475639 NCOA6Q14686 2063 aaPredicted RBP9.54□□□□□ -0.88
U2AF1-209ENST00000475639 A0A1W2PRE2 83 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 C12orf77C9JDV5 145 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 RPL39P5Q59GN2 51 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 RALGAPA1Q6GYQ0 2036 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 TRAV5A0A0B4J249 113 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 IGHV3-11P01762 117 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
U2AF1-209ENST00000475639 APOBEC3AP31941 199 aaPredicted RBP9.53□□□□□ -0.88
U2AF1-209ENST00000475639 C8orf46Q8TAG6 207 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 DLX4Q92988 240 aaPredicted RBP9.53□□□□□ -0.88
U2AF1-209ENST00000475639 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 Q0VG73 95 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 CT83Q5H943 113 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 ZNF625Q96I27 306 aaPredicted RBP9.53□□□□□ -0.88
U2AF1-209ENST00000475639 CLUHP3Q96NS8 147 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 IGLV3-1P01715 115 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 ZNF415Q09FC8 603 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 PVRIGQ6DKI7 326 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 BCL6BQ8N143 479 aaPredicted RBP9.53□□□□□ -0.88
U2AF1-209ENST00000475639 RASL10AQ92737 203 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 PSG8Q9UQ74 426 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 KLF12Q9Y4X4 402 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 TMEM8BA6NDV4 472 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 MIR17HGQ75NE6 70 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 OR5P3Q8WZ94 311 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 GTF3C1Q12789 2109 aa9.53□□□□□ -0.88
U2AF1-209ENST00000475639 RPL36AP83881 106 aaKnown RBP9.52□□□□□ -0.88
U2AF1-209ENST00000475639 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.88
U2AF1-209ENST00000475639 RPL36ALQ969Q0 106 aaKnown RBP9.52□□□□□ -0.88
U2AF1-209ENST00000475639 CHCHD1Q96BP2 118 aaKnown RBP9.52□□□□□ -0.88
U2AF1-209ENST00000475639 C7orf69Q9H7B7 122 aa9.52□□□□□ -0.88
U2AF1-209ENST00000475639 C9orf153Q5TBE3 101 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 OR10W1Q8NGF6 305 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 NEU4Q8WWR8 484 aaPredicted RBP9.52□□□□□ -0.89
U2AF1-209ENST00000475639 MRPL27Q9P0M9 148 aaKnown RBP9.52□□□□□ -0.89
U2AF1-209ENST00000475639 EPDR1Q9UM22 224 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 IGKV1D-13A0A0B4J2D9 117 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 PATE3B3GLJ2 98 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 C3orf79P0CE67 100 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 IGKV1-13P0DP09 117 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 Q6ZRM9 215 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 PRADC1Q9BSG0 188 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 GTSF1LQ9H1H1 148 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
U2AF1-209ENST00000475639 TNFRSF14Q92956 283 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 RNF125Q96EQ8 232 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
U2AF1-209ENST00000475639 GP6Q9HCN6 339 aa9.52□□□□□ -0.89
U2AF1-209ENST00000475639 NCR2O95944 276 aa9.51□□□□□ -0.89
U2AF1-209ENST00000475639 RCHY1Q96PM5 261 aa9.51□□□□□ -0.89
U2AF1-209ENST00000475639 IGKV1-27A0A075B6S5 117 aa9.51□□□□□ -0.89
U2AF1-209ENST00000475639 GATA2P23769 480 aaPredicted RBP9.51□□□□□ -0.89
U2AF1-209ENST00000475639 CMC4P56277 68 aaPredicted RBP9.51□□□□□ -0.89
U2AF1-209ENST00000475639 TFF3Q07654 80 aa9.51□□□□□ -0.89
U2AF1-209ENST00000475639 ZNF876PQ49A33 203 aa9.51□□□□□ -0.89
U2AF1-209ENST00000475639 PRSS22Q9GZN4 317 aa9.51□□□□□ -0.89
U2AF1-209ENST00000475639 TDRD6O60522 2096 aaKnown RBP9.51□□□□□ -0.89
U2AF1-209ENST00000475639 GLMPQ8WWB7 406 aa9.51□□□□□ -0.89
U2AF1-209ENST00000475639 USF3Q68DE3 2245 aa9.51□□□□□ -0.89
U2AF1-209ENST00000475639 IGHV3-64A0A075B6Q5 118 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 C17orf98A8MV24 154 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 UBE2DNLQ8IWF7 75 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 TAX1BP3O14907 124 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 Q6ZT83 130 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
U2AF1-209ENST00000475639 TP73-AS1Q9UF72 201 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms