RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZNF709Q8N972 641 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 KCNS1Q96KK3 526 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 TM2D3Q9BRN9 247 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 RABAC1Q9UI14 185 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 PDCD11Q14690 1871 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 EPM2AB3EWF7 344 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 CCL16O15467 120 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 TYROBPO43914 113 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 HLA-DOBP13765 273 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 P2RX1P51575 399 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 EFEMP1Q12805 493 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 ELOBQ15370 118 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF79Q15937 498 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 UBE2NLQ5JXB2 153 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 BVES-AS1Q5T3Y7 98 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 CLEC19AQ6UXS0 136 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 C16orf47Q6ZP98 133 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 OR10G8Q8NGN5 311 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 OR2T10Q8NGZ9 312 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 EIF5A2Q9GZV4 153 aaKnown RBP4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 MAP6D1Q9H9H5 199 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 NDUFB11Q9NX14 153 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 DSPPQ9NZW4 1301 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 HELZP42694 1942 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 TCHHQ07283 1943 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 IGKV1D-8A0A087WSZ0 117 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 TLCD2A6NGC4 264 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 H0Y9J4 135 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 SRSF10O75494 262 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 PROSCO94903 275 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 BTCP35070 178 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 OPRM1P35372 400 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 WDR86Q86TI4 376 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 LINC00311Q8N616 119 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 DEFB119Q8N690 84 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF114Q8NC26 417 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 COPS9Q8WXC6 57 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 VOPP1Q96AW1 172 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 GNPNAT1Q96EK6 184 aaPredicted RBP4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 MEIS3Q99687 375 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 SMDT1Q9H4I9 107 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 TXNL4BQ9NX01 149 aaKnown RBP4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 OR2W1Q9Y3N9 320 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 HES2Q9Y543 173 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 SPCS1Q9Y6A9 102 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 VWA8A3KMH1 1905 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 TENM1Q9UKZ4 2725 aa4.74□□□□□ -1.65
SMARCE1-208ENST00000474246 GON4LQ3T8J9 2241 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 TRBV24-1A0A075B6N3 115 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 TRAV12-2A0A075B6T6 113 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 TRAV8-1A0A0A6YYK1 113 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 IGLV1-36A0A0B4J1U3 117 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 MUC21A0A0G2JKD1 596 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 OOSP1A8MZH6 123 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 UPK2O00526 184 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 TRACP01848 142 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 SLC25A5P05141 298 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 FCGR3AP08637 254 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 FABP2P12104 132 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 RPL22P35268 128 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 QRFPP83859 136 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 SRSF3P84103 164 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF345Q14585 488 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 TGIF1Q15583 401 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 C1orf140Q5VVS0 124 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 C11orf87Q6NUJ2 197 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 OR10AG1Q8NH19 301 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF799Q96GE5 643 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 C18orf15Q96N68 181 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 MCEEQ96PE7 176 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 AGPAT4-IT1Q9H0P7 198 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 TMEM242Q9NWH2 141 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 TAAR3PQ9P1P4 343 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 VWFP04275 2813 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 DCHS2Q6V1P9 2916 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 BSNQ9UPA5 3926 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 PGPA6NDG6 321 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 FOXS1O43638 330 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 INSL3P51460 131 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 EBI3Q14213 229 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 SPRNQ5BIV9 151 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 LINC00305Q7Z4B0 112 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 NOTCH4Q99466 2003 aa4.73□□□□□ -1.65
SMARCE1-208ENST00000474246 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 NDUFC2-KCTD14E9PQ53 114 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 CD55P08174 381 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 LINC00869P0C866 280 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 PSMB3P49720 205 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 PSMB2P49721 201 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 TAS2R45P59539 299 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 PMCHL1Q16048 86 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 ABCA11PQ4W5N1 156 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 UNQ9165/PRO28630Q6UXU0 137 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 H2AFVQ71UI9 128 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 SLC25A42Q86VD7 318 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 RFLNBQ8N5W9 214 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 C11orf68Q9H3H3 251 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms