RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
DDX56-209ENST00000473924 ZNF688P0C7X2 276 aa9.23□□□□□ -0.93
DDX56-209ENST00000473924 RPL7P18124 248 aaKnown RBP9.23□□□□□ -0.93
DDX56-209ENST00000473924 ATF4P18848 351 aaPredicted RBP9.23□□□□□ -0.93
DDX56-209ENST00000473924 ID1P41134 155 aa9.23□□□□□ -0.93
DDX56-209ENST00000473924 Q6ZNX1 250 aa9.23□□□□□ -0.93
DDX56-209ENST00000473924 SBSPONQ8IVN8 264 aa9.23□□□□□ -0.93
DDX56-209ENST00000473924 TMEM37Q8WXS4 190 aa9.23□□□□□ -0.93
DDX56-209ENST00000473924 RSG1Q9BU20 258 aa9.23□□□□□ -0.93
DDX56-209ENST00000473924 TNFSF18Q9UNG2 199 aa9.23□□□□□ -0.93
DDX56-209ENST00000473924 LOC102724200A0A096LPH7 203 aaPredicted RBP9.22□□□□□ -0.93
DDX56-209ENST00000473924 SMLR1H3BR10 107 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 ARPC5O15511 151 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 NHLRC4P0CG21 123 aaPredicted RBP9.22□□□□□ -0.93
DDX56-209ENST00000473924 MEOX2P50222 304 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 ZNF266Q14584 549 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 ZNF124Q15973 351 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 PSMG4Q5JS54 123 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 GATAD1Q8WUU5 269 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 CITED4Q96RK1 184 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 WFDC1Q9HC57 220 aa9.22□□□□□ -0.93
DDX56-209ENST00000473924 hCG_2014768A0A024R1R8 64 aa9.21□□□□□ -0.94
DDX56-209ENST00000473924 RBMY1BA6NDE4 496 aaKnown RBP9.21□□□□□ -0.94
DDX56-209ENST00000473924 RBMY1EA6NEQ0 496 aaKnown RBP9.21□□□□□ -0.94
DDX56-209ENST00000473924 RBMY1DP0C7P1 496 aaKnown RBP9.21□□□□□ -0.94
DDX56-209ENST00000473924 SAMD13Q5VXD3 122 aa9.21□□□□□ -0.94
DDX56-209ENST00000473924 BPIFA4PQ86YQ2 179 aa9.21□□□□□ -0.94
DDX56-209ENST00000473924 C16orf92Q96LL3 132 aa9.21□□□□□ -0.94
DDX56-209ENST00000473924 PARD6GQ9BYG4 376 aaPredicted RBP9.21□□□□□ -0.94
DDX56-209ENST00000473924 SEPSECSQ9HD40 501 aaKnown RBP9.21□□□□□ -0.94
DDX56-209ENST00000473924 RNF222A6NCQ9 220 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 G3V3Q6 166 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 RPL35AP18077 110 aaKnown RBP9.2□□□□□ -0.94
DDX56-209ENST00000473924 PSMB3P49720 205 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 HAGHQ16775 308 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 GCSAMLQ5JQS6 135 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 FFAR4Q5NUL3 377 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 FAM78BQ5VT40 261 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 MORN5Q5VZ52 161 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 LINC00322Q6ZN03 302 aaPredicted RBP9.2□□□□□ -0.94
DDX56-209ENST00000473924 STHQ8IWL8 128 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 LRRC20Q8TCA0 184 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 LINC00052Q96N35 136 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 MFFQ9GZY8 342 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 ZMAT4Q9H898 229 aa9.2□□□□□ -0.94
DDX56-209ENST00000473924 BORCS7-ASMTA0A0B4J1R7 106 aa9.19□□□□□ -0.94
DDX56-209ENST00000473924 ISLRO14498 428 aa9.19□□□□□ -0.94
DDX56-209ENST00000473924 APOC4P55056 127 aa9.19□□□□□ -0.94
DDX56-209ENST00000473924 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.19□□□□□ -0.94
DDX56-209ENST00000473924 HSD17B11Q8NBQ5 300 aa9.19□□□□□ -0.94
DDX56-209ENST00000473924 TRAV5A0A0B4J249 113 aa9.18□□□□□ -0.94
DDX56-209ENST00000473924 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
DDX56-209ENST00000473924 SOCS3O14543 225 aa9.18□□□□□ -0.94
DDX56-209ENST00000473924 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
DDX56-209ENST00000473924 TIMM9Q9Y5J7 89 aa9.18□□□□□ -0.94
DDX56-209ENST00000473924 A0A087X0K7 114 aa9.17□□□□□ -0.94
DDX56-209ENST00000473924 TAAR5O14804 337 aa9.17□□□□□ -0.94
DDX56-209ENST00000473924 MRPS12O15235 138 aaKnown RBP9.17□□□□□ -0.94
DDX56-209ENST00000473924 SNRPCP09234 159 aaKnown RBP9.17□□□□□ -0.94
DDX56-209ENST00000473924 ACOT6Q3I5F7 207 aaPredicted RBP9.17□□□□□ -0.94
DDX56-209ENST00000473924 RPL7L1Q6DKI1 246 aaKnown RBP9.17□□□□□ -0.94
DDX56-209ENST00000473924 LCN15Q6UWW0 184 aa9.17□□□□□ -0.94
DDX56-209ENST00000473924 SPATA25Q9BR10 227 aa9.17□□□□□ -0.94
DDX56-209ENST00000473924 TM2D3Q9BRN9 247 aa9.17□□□□□ -0.94
DDX56-209ENST00000473924 MRPL32Q9BYC8 188 aaKnown RBP9.17□□□□□ -0.94
DDX56-209ENST00000473924 RPRMQ9NS64 109 aa9.17□□□□□ -0.94
DDX56-209ENST00000473924 FUT9Q9Y231 359 aa9.17□□□□□ -0.94
DDX56-209ENST00000473924 RFNGQ9Y644 331 aa9.17□□□□□ -0.94
DDX56-209ENST00000473924 KIR2DL5BA0A0G2JN68 375 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 KIR2DL5BA0A0G2JPC4 375 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 HMSDA8MTL9 139 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 CXCL2P19875 107 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 ATP6V0CP27449 155 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 RHOBP62745 196 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 SPATA31B1PQ5VZV4 182 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 IGFL4Q6B9Z1 124 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 EBLN2Q6P2I7 272 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 MIR17HGQ75NE6 70 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 AKAP14Q86UN6 197 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 KIR2DL5AQ8N109 375 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 OR11H4Q8NGC9 324 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 KIR2DL5BQ8NHK3 375 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 ST6GAL2Q96JF0 529 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 C17orf77Q96MU5 243 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 PSMG3Q9BT73 122 aaPredicted RBP9.16□□□□□ -0.94
DDX56-209ENST00000473924 CSTL1Q9H114 145 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 HRH4Q9H3N8 390 aa9.16□□□□□ -0.94
DDX56-209ENST00000473924 PRKDCP78527 4128 aaKnown RBP9.16□□□□□ -0.94
DDX56-209ENST00000473924 TGP01266 2768 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 A0A1W2PPV4 95 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 H3BTX0 84 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 UBE2CO00762 179 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 JTBO76095 146 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 IGLC2P0DOY2 106 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 M6PRP20645 277 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 ZNF345Q14585 488 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 GUK1Q16774 197 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 FOXI2Q6ZQN5 318 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 TCTE3Q8IZS6 198 aa9.15□□□□□ -0.94
DDX56-209ENST00000473924 KCNRGQ8N5I3 272 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms