RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TRGV9Q99603 122 aa8.69□□□□□ -1.02
TRAF4-209ENST00000473421 MIXL1Q9H2W2 232 aa8.69□□□□□ -1.02
TRAF4-209ENST00000473421 MDFICQ9P1T7 246 aa8.69□□□□□ -1.02
TRAF4-209ENST00000473421 RSL24D1Q9UHA3 163 aaKnown RBP8.69□□□□□ -1.02
TRAF4-209ENST00000473421 A0A087WXM4 84 aa8.68□□□□□ -1.02
TRAF4-209ENST00000473421 LINC00315P59091 139 aa8.68□□□□□ -1.02
TRAF4-209ENST00000473421 TAS2R19P59542 299 aa8.68□□□□□ -1.02
TRAF4-209ENST00000473421 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
TRAF4-209ENST00000473421 OR5I1Q13606 314 aa8.68□□□□□ -1.02
TRAF4-209ENST00000473421 Q5VSD8 79 aa8.68□□□□□ -1.02
TRAF4-209ENST00000473421 THAP8Q8NA92 274 aa8.68□□□□□ -1.02
TRAF4-209ENST00000473421 SLC35E1Q96K37 410 aa8.68□□□□□ -1.02
TRAF4-209ENST00000473421 PARD6GQ9BYG4 376 aaPredicted RBP8.68□□□□□ -1.02
TRAF4-209ENST00000473421 C14orf166Q9Y224 244 aaKnown RBP8.68□□□□□ -1.02
TRAF4-209ENST00000473421 PRSS46E5RG02 174 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 BOLA2-SMG1P6H3BVE0 249 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 IAPPP10997 89 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 ORM2P19652 201 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 GALR1P47211 349 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 HAMPP81172 84 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 FGL1Q08830 312 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 SMCO1Q147U7 214 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 GPR141Q7Z602 305 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 NOXA1Q86UR1 476 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 RNASE8Q8TDE3 154 aaKnown RBP8.67□□□□□ -1.02
TRAF4-209ENST00000473421 GNPNAT1Q96EK6 184 aaPredicted RBP8.67□□□□□ -1.02
TRAF4-209ENST00000473421 PFDN2Q9UHV9 154 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 SRRM2Q9UQ35 2752 aaKnown RBP8.67□□□□□ -1.02
TRAF4-209ENST00000473421 VPS13BQ7Z7G8 4022 aa8.67□□□□□ -1.02
TRAF4-209ENST00000473421 CCDC160A6NGH7 325 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 DUSP14O95147 198 aaKnown RBP8.66□□□□□ -1.02
TRAF4-209ENST00000473421 SMR3BP02814 79 aaPredicted RBP8.66□□□□□ -1.02
TRAF4-209ENST00000473421 MEOX2P50222 304 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 CCR6P51684 374 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 TAS2R60P59551 318 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 HIST1H1AQ02539 215 aaPredicted RBP8.66□□□□□ -1.02
TRAF4-209ENST00000473421 LINC00612Q8N6U2 182 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 ZNF738Q8NE65 137 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 OR51S1Q8NGJ8 323 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 RXFP4Q8TDU9 374 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 UPK3BQ9BT76 320 aa8.66□□□□□ -1.02
TRAF4-209ENST00000473421 TIMM8BQ9Y5J9 83 aaPredicted RBP8.66□□□□□ -1.02
TRAF4-209ENST00000473421 GABARAPH6UMI1 98 aa8.65□□□□□ -1.02
TRAF4-209ENST00000473421 PITX3O75364 302 aa8.65□□□□□ -1.02
TRAF4-209ENST00000473421 GABARAPO95166 117 aa8.65□□□□□ -1.02
TRAF4-209ENST00000473421 SNRPCP09234 159 aaKnown RBP8.65□□□□□ -1.02
TRAF4-209ENST00000473421 DNAH10OSP0CZ25 163 aa8.65□□□□□ -1.02
TRAF4-209ENST00000473421 OR8A1Q8NGG7 326 aa8.65□□□□□ -1.02
TRAF4-209ENST00000473421 OR1B1Q8NGR6 318 aa8.65□□□□□ -1.02
TRAF4-209ENST00000473421 IL22RA2Q969J5 263 aa8.65□□□□□ -1.02
TRAF4-209ENST00000473421 PAIP2BQ9ULR5 123 aaKnown RBP8.65□□□□□ -1.02
TRAF4-209ENST00000473421 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
TRAF4-209ENST00000473421 A0A0B4J2A0 478 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 GAGE12BA1L429 117 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 CTDSP2O14595 271 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 GAGE7O76087 117 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 GAGE12FP0CL80 117 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 GAGE12GP0CL81 117 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 GAGE12IP0CL82 117 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 CXCL3P19876 107 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 M6PRP20645 277 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 RHOBP62745 196 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 SURF2Q15527 256 aaPredicted RBP8.64□□□□□ -1.03
TRAF4-209ENST00000473421 CTF1Q16619 201 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 TMEM144Q7Z5S9 345 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 OR1S1Q8NH92 325 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 C16orf74Q96GX8 76 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 VSIG2Q96IQ7 327 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 SHPKQ9UHJ6 478 aa8.64□□□□□ -1.03
TRAF4-209ENST00000473421 H3BRN7 92 aa8.63□□□□□ -1.03
TRAF4-209ENST00000473421 NOL3O60936 208 aaKnown RBP8.63□□□□□ -1.03
TRAF4-209ENST00000473421 FABP1P07148 127 aa8.63□□□□□ -1.03
TRAF4-209ENST00000473421 AKR1C4P17516 323 aa8.63□□□□□ -1.03
TRAF4-209ENST00000473421 B2MP61769 119 aa8.63□□□□□ -1.03
TRAF4-209ENST00000473421 MZT2AQ6P582 158 aa8.63□□□□□ -1.03
TRAF4-209ENST00000473421 LINC00299Q6ZSB3 139 aa8.63□□□□□ -1.03
TRAF4-209ENST00000473421 OR4D5Q8NGN0 318 aa8.63□□□□□ -1.03
TRAF4-209ENST00000473421 A0A096LPF7 62 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 A0A1W2PPQ1 181 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 DISC1C4P0D8 188 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 PRAC2D3DTV9 90 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 PFDN1O60925 122 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 ZNF182P17025 639 aaPredicted RBP8.62□□□□□ -1.03
TRAF4-209ENST00000473421 PSG3Q16557 428 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 SAMD13Q5VXD3 122 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 GGNBP1Q5YKI7 109 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 TMEM263Q8WUH6 116 aaKnown RBP8.62□□□□□ -1.03
TRAF4-209ENST00000473421 ZNF503Q96F45 646 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 BCL7BQ9BQE9 202 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 TMPRSS5Q9H3S3 457 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 SLC45A2Q9UMX9 530 aa8.62□□□□□ -1.03
TRAF4-209ENST00000473421 MRPS12O15235 138 aaKnown RBP8.61□□□□□ -1.03
TRAF4-209ENST00000473421 AKAIN1P0CW23 69 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 ATP5IP56385 69 aaPredicted RBP8.61□□□□□ -1.03
TRAF4-209ENST00000473421 PATE2Q6UY27 113 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 Q6ZTI0 123 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 CLVS1Q8IUQ0 354 aaPredicted RBP8.61□□□□□ -1.03
TRAF4-209ENST00000473421 TMEM256Q8N2U0 113 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 ZBTB8BQ8NAP8 495 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms