RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 H7BYZ3 331 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 J3QRE1 110 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 SOCS3O14543 225 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 BUB3O43684 328 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 WBP4O75554 376 aaKnown RBP4.01□□□□□ -1.77
HDAC3-206ENST00000471968 ARL6IP5O75915 188 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 LIMS3P0CW19 117 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 LIMS4P0CW20 117 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 GABRB1P18505 474 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 PPT1P50897 306 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 SLAQ13239 276 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 GAMTQ14353 236 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 SPHARQ15513 63 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 TIGITQ495A1 244 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 C14orf177Q52M58 125 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 LAIR2Q6ISS4 152 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 DPPA3Q6W0C5 159 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 NKAIN3Q8N8D7 197 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 C9orf163Q8N9P6 203 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 APH1BQ8WW43 257 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 DEDD2Q8WXF8 326 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 IL22RA2Q969J5 263 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 SLC25A31Q9H0C2 315 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 ACOT13Q9NPJ3 140 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 TMEM140Q9NV12 185 aa4.01□□□□□ -1.77
HDAC3-206ENST00000471968 A0A1W2PPK0 400 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 SLC22A5O76082 557 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 DUSP14O95147 198 aaKnown RBP4□□□□□ -1.77
HDAC3-206ENST00000471968 CDK1P06493 297 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 UBBP0CG47 229 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 MYL9P24844 172 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 PSMA1P25786 263 aaKnown RBP4□□□□□ -1.77
HDAC3-206ENST00000471968 RFX2P48378 723 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 LSM3P62310 102 aaKnown RBP4□□□□□ -1.77
HDAC3-206ENST00000471968 DAZ2Q13117 558 aaKnown RBP4□□□□□ -1.77
HDAC3-206ENST00000471968 TRAM1Q15629 374 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 SSX1Q16384 188 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 C4orf46Q504U0 113 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 HSD17B12Q53GQ0 312 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 Q5BKY6 102 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 SPINK9Q5DT21 86 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 CLLU1Q5K131 121 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 PXDC1Q5TGL8 231 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 NRARPQ7Z6K4 114 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 LINC00518Q8N0U6 118 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 RNF185Q96GF1 192 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 C16orf92Q96LL3 132 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 HYLS1Q96M11 299 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 HSD17B10Q99714 261 aaKnown RBP4□□□□□ -1.77
HDAC3-206ENST00000471968 TXNDC17Q9BRA2 123 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 CABLES2Q9BTV7 478 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 PLCXD1Q9NUJ7 323 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 TAS2R8Q9NYW2 309 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 BOLA1Q9Y3E2 137 aa4□□□□□ -1.77
HDAC3-206ENST00000471968 PDCD5O14737 125 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 SNAPC5O75971 98 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 TSPAN13O95857 204 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 LALBAP00709 142 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 IGLV2-14P01704 120 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 S100A6P06703 90 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 FLI1Q01543 452 aaPredicted RBP3.99□□□□□ -1.77
HDAC3-206ENST00000471968 FHL2Q14192 279 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 CDH26Q8IXH8 852 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 NANOGP1Q8N7R0 232 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 RMI2Q96E14 147 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 TMEM56Q96MV1 263 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 SDHCQ99643 169 aaPredicted RBP3.99□□□□□ -1.77
HDAC3-206ENST00000471968 URM1Q9BTM9 101 aaKnown RBP3.99□□□□□ -1.77
HDAC3-206ENST00000471968 MRPL32Q9BYC8 188 aaKnown RBP3.99□□□□□ -1.77
HDAC3-206ENST00000471968 MED9Q9NWA0 146 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 PPP1R14DQ9NXH3 145 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 ELF5Q9UKW6 265 aaPredicted RBP3.99□□□□□ -1.77
HDAC3-206ENST00000471968 OR51B2Q9Y5P1 312 aa3.99□□□□□ -1.77
HDAC3-206ENST00000471968 TRAV8-7A0A075B6U6 113 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 TRBV5-5A0A0J9YX44 114 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 GSTZ1O43708 216 aaPredicted RBP3.98□□□□□ -1.77
HDAC3-206ENST00000471968 IFNA7P01567 189 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 IGKV1-17P01599 117 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 HLA-DQB1P01920 261 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 CD1AP06126 327 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 FGF2P09038 288 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 OR5AC1P0C628 307 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 NQO2P16083 231 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 GADD45AP24522 165 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 TAS2R31P59538 309 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 RRAS2P62070 204 aaPredicted RBP3.98□□□□□ -1.77
HDAC3-206ENST00000471968 RHOBP62745 196 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 FGL1Q08830 312 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 RAB11BQ15907 218 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 PSG3Q16557 428 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 MZT2BQ6NZ67 158 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 TEX261Q6UWH6 196 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 COMMD7Q86VX2 200 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 H1FOOQ8IZA3 346 aaPredicted RBP3.98□□□□□ -1.77
HDAC3-206ENST00000471968 C9orf62Q8N4C0 152 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 LYPD6BQ8NI32 183 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 Q8TAT8 98 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 ENKURQ8TC29 256 aa3.98□□□□□ -1.77
HDAC3-206ENST00000471968 SPACA4Q8TDM5 124 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms