RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 FGF7P21781 194 aa11.3□□□□□ -0.6
SDC3-203ENST00000471567 ID1P41134 155 aa11.3□□□□□ -0.6
SDC3-203ENST00000471567 MEOX2P50222 304 aa11.3□□□□□ -0.6
SDC3-203ENST00000471567 ZNF124Q15973 351 aa11.3□□□□□ -0.6
SDC3-203ENST00000471567 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
SDC3-203ENST00000471567 COX7A2P2O60397 106 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 CLINT1Q14677 625 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 MIC13Q5XKP0 118 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 OR1L4Q8NGR5 311 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 ATP5SQ99766 215 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 RSG1Q9BU20 258 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 NPCDR1Q9BY65 106 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 DNAJC4Q9NNZ3 241 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 SLC39A9Q9NUM3 307 aa11.29□□□□□ -0.6
SDC3-203ENST00000471567 ISLRO14498 428 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 SOCS3O14543 225 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 PSMB3P49720 205 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 B2MP61769 119 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 TMEM37Q8WXS4 190 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 PFDN5Q99471 154 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 WDR61Q9GZS3 305 aaKnown RBP11.28□□□□□ -0.6
SDC3-203ENST00000471567 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
SDC3-203ENST00000471567 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
SDC3-203ENST00000471567 Q6ZWC4 215 aa11.27□□□□□ -0.61
SDC3-203ENST00000471567 STHQ8IWL8 128 aa11.27□□□□□ -0.61
SDC3-203ENST00000471567 CSTL1Q9H114 145 aa11.27□□□□□ -0.61
SDC3-203ENST00000471567 KCNIP2Q9NS61 270 aa11.27□□□□□ -0.61
SDC3-203ENST00000471567 IFNA5P01569 189 aa11.26□□□□□ -0.61
SDC3-203ENST00000471567 ATF4P18848 351 aaPredicted RBP11.26□□□□□ -0.61
SDC3-203ENST00000471567 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
SDC3-203ENST00000471567 ZNF709Q8N972 641 aa11.26□□□□□ -0.61
SDC3-203ENST00000471567 GATAD1Q8WUU5 269 aa11.26□□□□□ -0.61
SDC3-203ENST00000471567 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
SDC3-203ENST00000471567 WWC2-AS2Q96NR7 200 aa11.26□□□□□ -0.61
SDC3-203ENST00000471567 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
SDC3-203ENST00000471567 TP53TG1Q9Y2A0 90 aa11.26□□□□□ -0.61
SDC3-203ENST00000471567 A0A087X0K7 114 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 C17orf112F2Z3M2 114 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 Q5BKY6 102 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 ACTL10Q5JWF8 245 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 TRPT1Q86TN4 253 aaKnown RBP11.25□□□□□ -0.61
SDC3-203ENST00000471567 BPIFA4PQ86YQ2 179 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 SCGB1C1Q8TD33 95 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 C16orf92Q96LL3 132 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 LINC00052Q96N35 136 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
SDC3-203ENST00000471567 MRPS12O15235 138 aaKnown RBP11.24□□□□□ -0.61
SDC3-203ENST00000471567 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
SDC3-203ENST00000471567 OR2T35Q8NGX2 323 aa11.24□□□□□ -0.61
SDC3-203ENST00000471567 OVOL2Q9BRP0 275 aa11.24□□□□□ -0.61
SDC3-203ENST00000471567 SMIM3Q9BZL3 60 aa11.24□□□□□ -0.61
SDC3-203ENST00000471567 RETNQ9HD89 108 aa11.24□□□□□ -0.61
SDC3-203ENST00000471567 STAB2Q8WWQ8 2551 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 SPP1P10451 314 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 TMEM41BQ5BJD5 291 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 MORN5Q5VZ52 161 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 SPATA31B1PQ5VZV4 182 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 FOXI2Q6ZQN5 318 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 RNF183Q96D59 192 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 WFDC1Q9HC57 220 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 RPRMQ9NS64 109 aa11.23□□□□□ -0.61
SDC3-203ENST00000471567 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
SDC3-203ENST00000471567 NBEAL2Q6ZNJ1 2754 aa11.22□□□□□ -0.61
SDC3-203ENST00000471567 H3BMM0 161 aa11.22□□□□□ -0.61
SDC3-203ENST00000471567 SPRY2O43597 315 aa11.22□□□□□ -0.61
SDC3-203ENST00000471567 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
SDC3-203ENST00000471567 CXCL2P19875 107 aa11.22□□□□□ -0.61
SDC3-203ENST00000471567 INO80EQ8NBZ0 244 aaPredicted RBP11.22□□□□□ -0.61
SDC3-203ENST00000471567 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
SDC3-203ENST00000471567 SAV1Q9H4B6 383 aaPredicted RBP11.22□□□□□ -0.61
SDC3-203ENST00000471567 TENM3Q9P273 2699 aa11.22□□□□□ -0.61
SDC3-203ENST00000471567 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
SDC3-203ENST00000471567 TRAV8-2A0A0B4J237 113 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 CA1P00915 261 aaPredicted RBP11.21□□□□□ -0.61
SDC3-203ENST00000471567 ZNF266Q14584 549 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 DEFB135Q30KP9 77 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 LCN15Q6UWW0 184 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 LRRC20Q8TCA0 184 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 C20orf173Q96LM9 149 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 HRH4Q9H3N8 390 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 TNFSF18Q9UNG2 199 aa11.21□□□□□ -0.61
SDC3-203ENST00000471567 AGRNO00468 2067 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 FXYD6-FXYD2A0A087WZ82 144 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 IGLC2P0DOY2 106 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 NUTF2P61970 127 aaKnown RBP11.2□□□□□ -0.62
SDC3-203ENST00000471567 GUK1Q16774 197 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 GCSAMLQ5JQS6 135 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 FAM78BQ5VT40 261 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 MRPL32Q9BYC8 188 aaKnown RBP11.2□□□□□ -0.62
SDC3-203ENST00000471567 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
SDC3-203ENST00000471567 TMEM14CQ9P0S9 112 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms