RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 SLC25A32Q9H2D1 315 aa12□□□□□ -0.49
GPC1-207ENST00000466624 SLC25A22Q9H936 323 aa12□□□□□ -0.49
GPC1-207ENST00000466624 SELENOKQ9Y6D0 94 aa12□□□□□ -0.49
GPC1-207ENST00000466624 GALR1P47211 349 aa11.99□□□□□ -0.49
GPC1-207ENST00000466624 EIF5AP63241 154 aaKnown RBP11.99□□□□□ -0.49
GPC1-207ENST00000466624 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
GPC1-207ENST00000466624 GCSAMLQ5JQS6 135 aa11.99□□□□□ -0.49
GPC1-207ENST00000466624 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
GPC1-207ENST00000466624 MBP02144 154 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 M6PRP20645 277 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 RPL11P62913 178 aaKnown RBP11.98□□□□□ -0.49
GPC1-207ENST00000466624 FAM78BQ5VT40 261 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 SAMD13Q5VXD3 122 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 LEMD1Q68G75 181 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 ZNF471Q9BX82 626 aaPredicted RBP11.98□□□□□ -0.49
GPC1-207ENST00000466624 NRN1Q9NPD7 142 aa11.98□□□□□ -0.49
GPC1-207ENST00000466624 AURKAIP1Q9NWT8 199 aaPredicted RBP11.98□□□□□ -0.49
GPC1-207ENST00000466624 DNASE2O00115 360 aaPredicted RBP11.97□□□□□ -0.49
GPC1-207ENST00000466624 MRPS12O15235 138 aaKnown RBP11.97□□□□□ -0.49
GPC1-207ENST00000466624 SPP1P10451 314 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 C4BPBP20851 252 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 MEOX2P50222 304 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 BPIFA4PQ86YQ2 179 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 STXBP6Q8NFX7 210 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 STOML3Q8TAV4 291 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 DCANP1Q8TF63 244 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 PRR25Q96S07 402 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 SH3BGRL3Q9H299 93 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
GPC1-207ENST00000466624 FUT9Q9Y231 359 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 RFNGQ9Y644 331 aa11.97□□□□□ -0.49
GPC1-207ENST00000466624 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.49
GPC1-207ENST00000466624 A0A087X0K7 114 aa11.96□□□□□ -0.49
GPC1-207ENST00000466624 K7EQG2 157 aa11.96□□□□□ -0.49
GPC1-207ENST00000466624 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.49
GPC1-207ENST00000466624 RHOBP62745 196 aa11.96□□□□□ -0.49
GPC1-207ENST00000466624 GBGT1Q8N5D6 347 aa11.96□□□□□ -0.49
GPC1-207ENST00000466624 TMEM14CQ9P0S9 112 aa11.96□□□□□ -0.49
GPC1-207ENST00000466624 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.49
GPC1-207ENST00000466624 SEC11BP0C7V7 166 aa11.95□□□□□ -0.5
GPC1-207ENST00000466624 TPT1P13693 172 aaKnown RBP11.95□□□□□ -0.5
GPC1-207ENST00000466624 CD81P60033 236 aa11.95□□□□□ -0.5
GPC1-207ENST00000466624 BAP18Q8IXM2 172 aa11.95□□□□□ -0.5
GPC1-207ENST00000466624 Q8N1Y9 231 aa11.95□□□□□ -0.5
GPC1-207ENST00000466624 OR10G4Q8NGN3 311 aa11.95□□□□□ -0.5
GPC1-207ENST00000466624 OR10G9Q8NGN4 311 aa11.95□□□□□ -0.5
GPC1-207ENST00000466624 OR10G7Q8NGN6 311 aa11.95□□□□□ -0.5
GPC1-207ENST00000466624 SOCS3O14543 225 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 CD7P09564 240 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 ATF4P18848 351 aaPredicted RBP11.94□□□□□ -0.5
GPC1-207ENST00000466624 TFPI2P48307 235 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 RAB2AP61019 212 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 TMEM41BQ5BJD5 291 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 SLC51BQ86UW2 128 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 FAM167A-AS1Q96KT0 104 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 C17orf77Q96MU5 243 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 SLC25A2Q9BXI2 301 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 C19orf73Q9NVV2 129 aa11.94□□□□□ -0.5
GPC1-207ENST00000466624 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
GPC1-207ENST00000466624 A0A1W2PPV4 95 aa11.93□□□□□ -0.5
GPC1-207ENST00000466624 IGLC2P0DOY2 106 aa11.93□□□□□ -0.5
GPC1-207ENST00000466624 TAS2R45P59539 299 aa11.93□□□□□ -0.5
GPC1-207ENST00000466624 GUK1Q16774 197 aa11.93□□□□□ -0.5
GPC1-207ENST00000466624 ODF3L2Q3SX64 289 aa11.93□□□□□ -0.5
GPC1-207ENST00000466624 SPATA31B1PQ5VZV4 182 aa11.93□□□□□ -0.5
GPC1-207ENST00000466624 WFDC3Q8IUB2 231 aa11.93□□□□□ -0.5
GPC1-207ENST00000466624 K7EIL1 84 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 ISLRO14498 428 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 PRB2P02812 416 aaPredicted RBP11.92□□□□□ -0.5
GPC1-207ENST00000466624 ID1P41134 155 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 CDC34P49427 236 aaPredicted RBP11.92□□□□□ -0.5
GPC1-207ENST00000466624 PSMB3P49720 205 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 SNRPD3P62318 126 aaKnown RBP11.92□□□□□ -0.5
GPC1-207ENST00000466624 KHDC3LQ587J8 217 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 AKR1C8PQ5T2L2 129 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 LCN15Q6UWW0 184 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
GPC1-207ENST00000466624 HRH4Q9H3N8 390 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 MAP6D1Q9H9H5 199 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 RPRMQ9NS64 109 aa11.92□□□□□ -0.5
GPC1-207ENST00000466624 A8MZ25 164 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 OR11H12B2RN74 326 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 UMAD1C9J7I0 102 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 ZNF253O75346 499 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 HIST1H1EP10412 219 aaKnown RBP11.91□□□□□ -0.5
GPC1-207ENST00000466624 DEFA6Q01524 100 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 EIF5AL1Q6IS14 154 aaKnown RBP11.91□□□□□ -0.5
GPC1-207ENST00000466624 FAM122CQ6P4D5 195 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 FAM24BQ8N5W8 94 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 SLC50A1Q9BRV3 221 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 ACTR3CQ9C0K3 210 aaPredicted RBP11.91□□□□□ -0.5
GPC1-207ENST00000466624 OR51M1Q9H341 326 aa11.91□□□□□ -0.5
GPC1-207ENST00000466624 FBN3Q75N90 2809 aa11.9□□□□□ -0.5
GPC1-207ENST00000466624 NKX2-5P52952 324 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms