RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 IGHV3-23P01764 117 aa14.29□□□□□ -0.12
COL9A3-205ENST00000466192 LINC01356Q8N9X3 169 aa14.29□□□□□ -0.12
COL9A3-205ENST00000466192 PACRGQ96M98 296 aaPredicted RBP14.29□□□□□ -0.12
COL9A3-205ENST00000466192 G3V318 75 aa14.29□□□□□ -0.12
COL9A3-205ENST00000466192 IL4P05112 153 aa14.29□□□□□ -0.12
COL9A3-205ENST00000466192 SLC25A5P05141 298 aaKnown RBP14.29□□□□□ -0.12
COL9A3-205ENST00000466192 GATA3P23771 443 aa14.29□□□□□ -0.12
COL9A3-205ENST00000466192 ZNF491Q8N8L2 437 aa14.29□□□□□ -0.12
COL9A3-205ENST00000466192 FBXL7Q9UJT9 491 aa14.29□□□□□ -0.12
COL9A3-205ENST00000466192 TRAV30A0A087WSZ9 112 aa14.28□□□□□ -0.12
COL9A3-205ENST00000466192 Q56UQ5 140 aa14.28□□□□□ -0.12
COL9A3-205ENST00000466192 IL36BQ9NZH7 164 aa14.28□□□□□ -0.12
COL9A3-205ENST00000466192 RPH3ALQ9UNE2 315 aa14.28□□□□□ -0.12
COL9A3-205ENST00000466192 V9GYV3 84 aa14.28□□□□□ -0.12
COL9A3-205ENST00000466192 ISLRO14498 428 aa14.27□□□□□ -0.12
COL9A3-205ENST00000466192 GCGP01275 180 aa14.27□□□□□ -0.12
COL9A3-205ENST00000466192 RNF125Q96EQ8 232 aa14.27□□□□□ -0.12
COL9A3-205ENST00000466192 NEU1Q99519 415 aa14.27□□□□□ -0.12
COL9A3-205ENST00000466192 HIST1H2BLQ99880 126 aa14.27□□□□□ -0.12
COL9A3-205ENST00000466192 PITPNC1Q9UKF7 332 aa14.27□□□□□ -0.12
COL9A3-205ENST00000466192 EPDR1Q9UM22 224 aa14.27□□□□□ -0.12
COL9A3-205ENST00000466192 YPEL3P61236 119 aaPredicted RBP14.27□□□□□ -0.13
COL9A3-205ENST00000466192 DEFB113Q30KQ7 82 aa14.27□□□□□ -0.13
COL9A3-205ENST00000466192 ACTL10Q5JWF8 245 aa14.27□□□□□ -0.13
COL9A3-205ENST00000466192 H3BUX3 64 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 JOSD1Q15040 202 aaPredicted RBP14.26□□□□□ -0.13
COL9A3-205ENST00000466192 LY6EQ16553 131 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 KLK9Q2XQG4 91 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 SGK494Q96LW2 274 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 Q9H3A6 140 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 BEX4Q9NWD9 120 aaPredicted RBP14.26□□□□□ -0.13
COL9A3-205ENST00000466192 ZNF586Q9NXT0 402 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 KLK9Q9UKQ9 250 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 WI2-2373I1.2A0A1W2PRP0 233 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 A8MWP6 167 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 RNF223E7ERA6 249 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 RPEL1Q2QD12 228 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 BAGE2Q86Y30 109 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 BTF3L4Q96K17 158 aa14.26□□□□□ -0.13
COL9A3-205ENST00000466192 NOL4LQ96MY1 436 aaPredicted RBP14.26□□□□□ -0.13
COL9A3-205ENST00000466192 OR2T8A6NH00 312 aa14.25□□□□□ -0.13
COL9A3-205ENST00000466192 IBA57Q5T440 356 aaKnown RBP14.25□□□□□ -0.13
COL9A3-205ENST00000466192 BCL6BQ8N143 479 aaPredicted RBP14.25□□□□□ -0.13
COL9A3-205ENST00000466192 SHANK2-AS3Q9BTD1 123 aa14.25□□□□□ -0.13
COL9A3-205ENST00000466192 TMEM14CQ9P0S9 112 aa14.25□□□□□ -0.13
COL9A3-205ENST00000466192 TRBV9A0A0B4J1U6 114 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 RPL15P61313 204 aaKnown RBP14.24□□□□□ -0.13
COL9A3-205ENST00000466192 RHOGP84095 191 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 LOXL1Q08397 574 aaPredicted RBP14.24□□□□□ -0.13
COL9A3-205ENST00000466192 USF2Q15853 346 aaPredicted RBP14.24□□□□□ -0.13
COL9A3-205ENST00000466192 C15orf32Q32M92 178 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 TMEM68Q96MH6 324 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 OSTCQ9NRP0 149 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 A6NDX4 124 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 H3BRN7 92 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 TGFAP01135 160 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 CTSGP08311 255 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 HIST1H1EP10412 219 aaKnown RBP14.24□□□□□ -0.13
COL9A3-205ENST00000466192 FCGR2BP31994 310 aaPredicted RBP14.24□□□□□ -0.13
COL9A3-205ENST00000466192 UBE2G1P62253 170 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 TMEM183AQ8IXX5 376 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 C5orf17Q8NAS9 161 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 VN1R17PQ8TDU5 208 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 TRAPPC1Q9Y5R8 145 aa14.24□□□□□ -0.13
COL9A3-205ENST00000466192 TMEM183BQ1AE95 376 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 Q5PR19 223 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 BPIFA4PQ86YQ2 179 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 OR8I2Q8N0Y5 310 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 ATG101Q9BSB4 218 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 CHRDL1Q9BU40 450 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 NDUFAF3Q9BU61 184 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 SERTAD4Q9NUC0 356 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 TCAPO15273 167 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 GZMBP10144 247 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 ADMP35318 185 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 C19orf54Q5BKX5 351 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 COA6Q5JTJ3 125 aaKnown RBP14.23□□□□□ -0.13
COL9A3-205ENST00000466192 LRRC75A-AS1Q8N1F1 130 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 EXOC3-AS1Q8N2X6 119 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 ZNF502Q8TBZ5 544 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 TXN2Q99757 166 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 LINC00527Q9UJ94 153 aa14.23□□□□□ -0.13
COL9A3-205ENST00000466192 PLA2G2AP14555 144 aa14.22□□□□□ -0.13
COL9A3-205ENST00000466192 C17orf77Q96MU5 243 aa14.22□□□□□ -0.13
COL9A3-205ENST00000466192 XKRY2A2RUG3 117 aa14.22□□□□□ -0.13
COL9A3-205ENST00000466192 TCRAP04437 139 aa14.22□□□□□ -0.13
COL9A3-205ENST00000466192 NUTF2P61970 127 aaKnown RBP14.22□□□□□ -0.13
COL9A3-205ENST00000466192 PRR27Q6MZM9 219 aa14.22□□□□□ -0.13
COL9A3-205ENST00000466192 MS4A10Q96PG2 267 aa14.22□□□□□ -0.13
COL9A3-205ENST00000466192 TRAV9-1A0A075B6T8 112 aa14.21□□□□□ -0.13
COL9A3-205ENST00000466192 TRAV41A0A0B4J266 112 aa14.21□□□□□ -0.13
COL9A3-205ENST00000466192 ZNF705GA8MUZ8 300 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-205ENST00000466192 J3QLI3 93 aa14.21□□□□□ -0.13
COL9A3-205ENST00000466192 CA1P00915 261 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-205ENST00000466192 TCL1AP56279 114 aa14.21□□□□□ -0.13
COL9A3-205ENST00000466192 ZNF664Q8N3J9 261 aa14.21□□□□□ -0.13
COL9A3-205ENST00000466192 OR4F17Q8NGA8 305 aa14.21□□□□□ -0.13
COL9A3-205ENST00000466192 OTORQ9NRC9 128 aa14.21□□□□□ -0.13
COL9A3-205ENST00000466192 KLF12Q9Y4X4 402 aa14.21□□□□□ -0.13
COL9A3-205ENST00000466192 ZNF469Q96JG9 3925 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms