RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 GALR1P47211 349 aa15.72■□□□□ 0.11
LIME1-203ENST00000465591 ZNF709Q8N972 641 aa15.72■□□□□ 0.11
LIME1-203ENST00000465591 OR10P1Q8NGE3 313 aa15.72■□□□□ 0.11
LIME1-203ENST00000465591 C2orf50Q96LR7 162 aa15.72■□□□□ 0.11
LIME1-203ENST00000465591 SLC25A39Q9BZJ4 359 aaPredicted RBP15.72■□□□□ 0.11
LIME1-203ENST00000465591 C11orf1Q9H5F2 150 aa15.72■□□□□ 0.11
LIME1-203ENST00000465591 FNDC10F2Z333 226 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 SSNA1O43805 119 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 PLP1P60201 277 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 NUTF2P61970 127 aaKnown RBP15.71■□□□□ 0.11
LIME1-203ENST00000465591 SLC38A11Q08AI6 406 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 C16orf92Q96LL3 132 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 UHRF2Q96PU4 802 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 SHANK2-AS3Q9BTD1 123 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 C1QTNF4Q9BXJ3 329 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 NPVFQ9HCQ7 196 aa15.71■□□□□ 0.11
LIME1-203ENST00000465591 LSM5Q9Y4Y9 91 aaKnown RBP15.71■□□□□ 0.11
LIME1-203ENST00000465591 K7EPK0 472 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 IGFL4Q6B9Z1 124 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 PATE2Q6UY27 113 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 OR4B1Q8NGF8 309 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 SLC35B3Q9H1N7 401 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 HRH4Q9H3N8 390 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 CELA1Q9UNI1 258 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 HIGD1AQ9Y241 93 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 VPS13DQ5THJ4 4388 aa15.7■□□□□ 0.1
LIME1-203ENST00000465591 TRAV8-2A0A0B4J237 113 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 A0A0J9YX75 114 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 HYPMO75409 117 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 HLA-DMBP28068 263 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 MEOX2P50222 304 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 SELENOTP62341 195 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 FAM78BQ5VT40 261 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 ZNF705AQ6ZN79 300 aaPredicted RBP15.69■□□□□ 0.1
LIME1-203ENST00000465591 CLUHP3Q96NS8 147 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 MGAT4CQ9UBM8 478 aa15.69■□□□□ 0.1
LIME1-203ENST00000465591 GOSR2O14653 212 aa15.68■□□□□ 0.1
LIME1-203ENST00000465591 OR5G3P0C626 314 aa15.68■□□□□ 0.1
LIME1-203ENST00000465591 RAP2BP61225 183 aa15.68■□□□□ 0.1
LIME1-203ENST00000465591 IL15RAQ13261 267 aa15.68■□□□□ 0.1
LIME1-203ENST00000465591 TEPPQ6URK8 271 aa15.68■□□□□ 0.1
LIME1-203ENST00000465591 GPR82Q96P67 336 aa15.68■□□□□ 0.1
LIME1-203ENST00000465591 BIRC6Q9NR09 4857 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 L7N2F9 121 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 DEDDO75618 318 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 VAMP2P63027 116 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 OXA1LQ15070 435 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 SAMD13Q5VXD3 122 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 Q6ZTC4 211 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 RNF182Q8N6D2 247 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 ARL6Q9H0F7 186 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 RPRMQ9NS64 109 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 ALG5Q9Y673 324 aa15.67■□□□□ 0.1
LIME1-203ENST00000465591 FAM24AA6NFZ4 105 aa15.66■□□□□ 0.1
LIME1-203ENST00000465591 ZNF705FA8MVS1 300 aaPredicted RBP15.66■□□□□ 0.1
LIME1-203ENST00000465591 AGPAT2O15120 278 aa15.66■□□□□ 0.1
LIME1-203ENST00000465591 ZNF705DP0CH99 300 aaPredicted RBP15.66■□□□□ 0.1
LIME1-203ENST00000465591 ZNF705BP0CI00 300 aaPredicted RBP15.66■□□□□ 0.1
LIME1-203ENST00000465591 CYCSP99999 105 aaKnown RBP15.66■□□□□ 0.1
LIME1-203ENST00000465591 EBLN2Q6P2I7 272 aa15.66■□□□□ 0.1
LIME1-203ENST00000465591 MGST2Q99735 147 aa15.66■□□□□ 0.1
LIME1-203ENST00000465591 GGACTQ9BVM4 153 aa15.66■□□□□ 0.1
LIME1-203ENST00000465591 A8MTW9 85 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 CST7O76096 145 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 PSG9Q00887 426 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 FGL1Q08830 312 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 SPATA31B1PQ5VZV4 182 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 AMTNQ6UX39 209 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 ZNF767PQ75MW2 155 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 C2CD4CQ8TF44 421 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 ARV1Q9H2C2 271 aa15.65■□□□□ 0.1
LIME1-203ENST00000465591 IGHV3OR16-12A0A075B7B8 117 aa15.64■□□□□ 0.09
LIME1-203ENST00000465591 MRPS12O15235 138 aaKnown RBP15.64■□□□□ 0.09
LIME1-203ENST00000465591 RPL7P18124 248 aaKnown RBP15.64■□□□□ 0.09
LIME1-203ENST00000465591 PVALBP20472 110 aaPredicted RBP15.64■□□□□ 0.09
LIME1-203ENST00000465591 S100A7P31151 101 aa15.64■□□□□ 0.09
LIME1-203ENST00000465591 BCAP31P51572 246 aa15.64■□□□□ 0.09
LIME1-203ENST00000465591 CAV2P51636 162 aa15.64■□□□□ 0.09
LIME1-203ENST00000465591 RAB32Q13637 225 aa15.64■□□□□ 0.09
LIME1-203ENST00000465591 C12orf74Q32Q52 190 aa15.64■□□□□ 0.09
LIME1-203ENST00000465591 C1orf158Q8N1D5 194 aa15.64■□□□□ 0.09
LIME1-203ENST00000465591 NEU1Q99519 415 aa15.64■□□□□ 0.09
LIME1-203ENST00000465591 SIX6O95475 246 aa15.63■□□□□ 0.09
LIME1-203ENST00000465591 PRB4P10163 310 aaPredicted RBP15.63■□□□□ 0.09
LIME1-203ENST00000465591 S100A10P60903 97 aa15.63■□□□□ 0.09
LIME1-203ENST00000465591 ZNF546Q86UE3 836 aa15.63■□□□□ 0.09
LIME1-203ENST00000465591 RPP25LQ8N5L8 163 aaKnown RBP15.63■□□□□ 0.09
LIME1-203ENST00000465591 NMES1Q9C002 83 aa15.63■□□□□ 0.09
LIME1-203ENST00000465591 MED28Q9H204 178 aa15.63■□□□□ 0.09
LIME1-203ENST00000465591 IGSF23A1L1A6 192 aa15.62■□□□□ 0.09
LIME1-203ENST00000465591 C11orf94C9JXX5 98 aa15.62■□□□□ 0.09
LIME1-203ENST00000465591 MORN5Q5VZ52 161 aa15.62■□□□□ 0.09
LIME1-203ENST00000465591 LGALS9CQ6DKI2 356 aa15.62■□□□□ 0.09
LIME1-203ENST00000465591 TMEM37Q8WXS4 190 aa15.62■□□□□ 0.09
LIME1-203ENST00000465591 APLNQ9ULZ1 77 aa15.62■□□□□ 0.09
LIME1-203ENST00000465591 A0A087X0K7 114 aa15.61■□□□□ 0.09
LIME1-203ENST00000465591 IGLL5B9A064 214 aa15.61■□□□□ 0.09
LIME1-203ENST00000465591 RLN2P04090 185 aa15.61■□□□□ 0.09
LIME1-203ENST00000465591 SNRPCP09234 159 aaKnown RBP15.61■□□□□ 0.09
LIME1-203ENST00000465591 CNN1P51911 297 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms