RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 NUPR1O60356 82 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 HLA-EP13747 358 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 DYNLT3P51808 116 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 LINC00052Q96N35 136 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 TP53RKQ96S44 253 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 PHB2Q99623 299 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 MED29Q9NX70 200 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 COL24A1Q17RW2 1714 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 CEP164Q9UPV0 1460 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 EIF3AQ14152 1382 aaKnown RBP0.62□□□□□ -2.31
SMC4-205ENST00000465563 CRHP06850 196 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 INSL3P51460 131 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 GNG5P63218 68 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 PSG9Q00887 426 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 C1orf134Q5TEV5 83 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 HACD4Q5VWC8 232 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 LINC00322Q6ZN03 302 aaPredicted RBP0.62□□□□□ -2.31
SMC4-205ENST00000465563 ST6GALNAC3Q8NDV1 305 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 TMEM70Q9BUB7 260 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 NPCDR1Q9BY65 106 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 TAS2R7Q9NYW3 318 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 PCTPQ9UKL6 214 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 ASB4Q9Y574 426 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 LY96Q9Y6Y9 160 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 KDM6AO15550 1401 aaPredicted RBP0.62□□□□□ -2.31
SMC4-205ENST00000465563 ZDBF2Q9HCK1 2354 aa0.62□□□□□ -2.31
SMC4-205ENST00000465563 CECR2Q9BXF3 1484 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 MGAMO43451 1857 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 TRAV10A0A0B4J240 114 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 TLCD2A6NGC4 264 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 FAM74A1Q5RGS3 127 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 C4orf22Q6V702 233 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 Q8TAT8 98 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 BORCS5Q969J3 196 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 CCDC94Q9BW85 323 aaPredicted RBP0.61□□□□□ -2.31
SMC4-205ENST00000465563 SH3BGRL3Q9H299 93 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 ORMDL1Q9P0S3 153 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 MUC4Q99102 2169 aa0.61□□□□□ -2.31
SMC4-205ENST00000465563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.6□□□□□ -2.31
SMC4-205ENST00000465563 DUXBA0A1W2PPF3 345 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 CST8O60676 142 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 ATG12O94817 140 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 NDUFC2O95298 119 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 NFYBP25208 207 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 EIF5AL1Q6IS14 154 aaKnown RBP0.6□□□□□ -2.31
SMC4-205ENST00000465563 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 LYSMD1Q96S90 227 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 PTPRDP23468 1912 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 ZNF462Q96JM2 2506 aa0.6□□□□□ -2.31
SMC4-205ENST00000465563 AIPO00170 330 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 EFNA4P52798 201 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 MYL5Q02045 173 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 C2orf82Q6UX34 121 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 LYG2Q86SG7 212 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 OR5D14Q8NGL3 314 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 PPTC7Q8NI37 304 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 POP5Q969H6 163 aaKnown RBP0.59□□□□□ -2.31
SMC4-205ENST00000465563 CEP19Q96LK0 163 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 GPX7Q96SL4 187 aaPredicted RBP0.59□□□□□ -2.31
SMC4-205ENST00000465563 GINS3Q9BRX5 216 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 PSTPIP2Q9H939 334 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 POPDC3Q9HBV1 291 aa0.59□□□□□ -2.31
SMC4-205ENST00000465563 LYRM2Q9NU23 88 aaPredicted RBP0.59□□□□□ -2.31
SMC4-205ENST00000465563 TANC2Q9HCD6 1990 aa0.59□□□□□ -2.32
SMC4-205ENST00000465563 ADGBQ8N7X0 1667 aa0.59□□□□□ -2.32
SMC4-205ENST00000465563 NISCHQ9Y2I1 1504 aa0.59□□□□□ -2.32
SMC4-205ENST00000465563 FRMPD1Q5SYB0 1578 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 C17orf112F2Z3M2 114 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 G3V2T6 193 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 H7C1C5 153 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 MFSD11O43934 449 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 BANF1O75531 89 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 KLF7O75840 302 aaPredicted RBP0.58□□□□□ -2.32
SMC4-205ENST00000465563 IFNA1P01562 189 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 CD2P06729 351 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 PHBP35232 272 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 LCN6P62502 163 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 SCGB2B2Q4G0G5 96 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 OR5D16Q8NGK9 328 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 PAIP2Q9BPZ3 127 aaKnown RBP0.58□□□□□ -2.32
SMC4-205ENST00000465563 PBOV1Q9GZY1 135 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 TMEM14CQ9P0S9 112 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 SS18L2Q9UHA2 77 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 NINQ8N4C6 2090 aa0.58□□□□□ -2.32
SMC4-205ENST00000465563 MUC5ACP98088 5654 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 UHRF1BP1Q6BDS2 1440 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 NCR3O14931 201 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 ERC2-IT1O76042 136 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 DNAL4O96015 105 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 TRGC2P03986 189 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 OR10J4P0C629 311 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 CXCL8P10145 99 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 ARPP19P56211 112 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 CDK6Q00534 326 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 AKR1C8PQ5T2L2 129 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 SBSPONQ8IVN8 264 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 ZC2HC1AQ96GY0 325 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 OR2J1Q9GZK6 312 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 KNTC1P50748 2209 aa0.57□□□□□ -2.32
SMC4-205ENST00000465563 CD109Q6YHK3 1445 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms