RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 NPCDR1Q9BY65 106 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 SEPSECSQ9HD40 501 aaKnown RBP10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 DNAJC4Q9NNZ3 241 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 SLC39A9Q9NUM3 307 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 RNF24Q9Y225 148 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 C10orf113Q5VZT2 155 aa10.74□□□□□ -0.69
SQSTM1-205ENST00000464493 LINC00305Q7Z4B0 112 aa10.74□□□□□ -0.69
SQSTM1-205ENST00000464493 OR1L4Q8NGR5 311 aa10.74□□□□□ -0.69
SQSTM1-205ENST00000464493 RSG1Q9BU20 258 aa10.74□□□□□ -0.69
SQSTM1-205ENST00000464493 SMIM3Q9BZL3 60 aa10.74□□□□□ -0.69
SQSTM1-205ENST00000464493 WDR61Q9GZS3 305 aaKnown RBP10.74□□□□□ -0.69
SQSTM1-205ENST00000464493 PXMP4Q9Y6I8 212 aa10.74□□□□□ -0.69
SQSTM1-205ENST00000464493 HUWE1Q7Z6Z7 4374 aaKnown RBP10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 RPL35AP18077 110 aaKnown RBP10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 RPL7P18124 248 aaKnown RBP10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 ID1P41134 155 aa10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 PSMG4Q5JS54 123 aa10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 ZNF709Q8N972 641 aa10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 OR2T35Q8NGX2 323 aa10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 PFDN5Q99471 154 aa10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 SPATA25Q9BR10 227 aa10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 U3KQK5 164 aa10.73□□□□□ -0.69
SQSTM1-205ENST00000464493 IFNA5P01569 189 aa10.72□□□□□ -0.69
SQSTM1-205ENST00000464493 MEOX2P50222 304 aa10.72□□□□□ -0.69
SQSTM1-205ENST00000464493 APOC4P55056 127 aa10.72□□□□□ -0.69
SQSTM1-205ENST00000464493 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
SQSTM1-205ENST00000464493 SCGB1C1Q8TD33 95 aa10.72□□□□□ -0.69
SQSTM1-205ENST00000464493 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 C17orf112F2Z3M2 114 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 SOCS3O14543 225 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 ATF4P18848 351 aaPredicted RBP10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 PSMB3P49720 205 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 STHQ8IWL8 128 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 INO80EQ8NBZ0 244 aaPredicted RBP10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 KIR2DL5BQ8NHK3 375 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 GATAD1Q8WUU5 269 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 C16orf92Q96LL3 132 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 C17orf77Q96MU5 243 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 LINC00052Q96N35 136 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 RCHY1Q96PM5 261 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 AQP10Q96PS8 301 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 WFDC1Q9HC57 220 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 KCNIP2Q9NS61 270 aa10.71□□□□□ -0.69
SQSTM1-205ENST00000464493 TENM3Q9P273 2699 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 FXYD6-FXYD2A0A087WZ82 144 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 KNCNA6PVL3 124 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 UBE2CO00762 179 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 ISLRO14498 428 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 ACTL10Q5JWF8 245 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 MORN5Q5VZ52 161 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 PARD6GQ9BYG4 376 aaPredicted RBP10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 CSTL1Q9H114 145 aa10.7□□□□□ -0.7
SQSTM1-205ENST00000464493 AGRNO00468 2067 aa10.69□□□□□ -0.7
SQSTM1-205ENST00000464493 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
SQSTM1-205ENST00000464493 MRPS12O15235 138 aaKnown RBP10.69□□□□□ -0.7
SQSTM1-205ENST00000464493 GCSAMLQ5JQS6 135 aa10.69□□□□□ -0.7
SQSTM1-205ENST00000464493 A0A087X0K7 114 aa10.68□□□□□ -0.7
SQSTM1-205ENST00000464493 G3V3Q6 166 aa10.68□□□□□ -0.7
SQSTM1-205ENST00000464493 Q6ZWC4 215 aa10.68□□□□□ -0.7
SQSTM1-205ENST00000464493 RETNQ9HD89 108 aa10.68□□□□□ -0.7
SQSTM1-205ENST00000464493 TNFSF18Q9UNG2 199 aa10.68□□□□□ -0.7
SQSTM1-205ENST00000464493 STAB2Q8WWQ8 2551 aa10.68□□□□□ -0.7
SQSTM1-205ENST00000464493 ZNF266Q14584 549 aa10.67□□□□□ -0.7
SQSTM1-205ENST00000464493 FAM78BQ5VT40 261 aa10.67□□□□□ -0.7
SQSTM1-205ENST00000464493 TRPT1Q86TN4 253 aaKnown RBP10.67□□□□□ -0.7
SQSTM1-205ENST00000464493 LRRC20Q8TCA0 184 aa10.67□□□□□ -0.7
SQSTM1-205ENST00000464493 C20orf173Q96LM9 149 aa10.67□□□□□ -0.7
SQSTM1-205ENST00000464493 RPRMQ9NS64 109 aa10.67□□□□□ -0.7
SQSTM1-205ENST00000464493 TRAV8-2A0A0B4J237 113 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 RNF222A6NCQ9 220 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 SMLR1H3BR10 107 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 FFAR4Q5NUL3 377 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 IGFL4Q6B9Z1 124 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 Q6ZNX1 250 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 OVOL2Q9BRP0 275 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 HRH4Q9H3N8 390 aa10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 SAV1Q9H4B6 383 aaPredicted RBP10.66□□□□□ -0.7
SQSTM1-205ENST00000464493 H3BMM0 161 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 SPRY2O43597 315 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 IGLC2P0DOY2 106 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 SPP1P10451 314 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 HLA-DRB4P13762 266 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 CXCL2P19875 107 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 DEFB1P60022 68 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 DEFB135Q30KP9 77 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 GDF5OSQ5U4N7 250 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 MORN3Q6PF18 240 aaPredicted RBP10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 LCN15Q6UWW0 184 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 RNF182Q8N6D2 247 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 TP53TG1Q9Y2A0 90 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 TIMM9Q9Y5J7 89 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 RFNGQ9Y644 331 aa10.65□□□□□ -0.7
SQSTM1-205ENST00000464493 HLA-DRB4X5D2U9 266 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms