RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 BAXQ07812 192 aa13.54□□□□□ -0.24
CDKN1A-206ENST00000462537 FGL1Q08830 312 aa13.54□□□□□ -0.24
CDKN1A-206ENST00000462537 RAB31Q13636 194 aa13.54□□□□□ -0.24
CDKN1A-206ENST00000462537 TMEM41BQ5BJD5 291 aa13.54□□□□□ -0.24
CDKN1A-206ENST00000462537 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
CDKN1A-206ENST00000462537 ARV1Q9H2C2 271 aa13.54□□□□□ -0.24
CDKN1A-206ENST00000462537 UBE2L5PA0A1B0GUS4 154 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 H3BMM0 161 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 COX7A2P2O60397 106 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 HLA-DRB4P13762 266 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 RPL7P18124 248 aaKnown RBP13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 DEFB1P60022 68 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 PATE2Q6UY27 113 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 CLEC5AQ9NY25 188 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 HLA-DRB4X5D2U9 266 aa13.53□□□□□ -0.24
CDKN1A-206ENST00000462537 E5RGE8 158 aa13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 IGKV3-20P01619 116 aa13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 GIG44P09565 113 aaPredicted RBP13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 EWSR1Q01844 656 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 PMS2P11Q13670 270 aa13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 GDF5OSQ5U4N7 250 aa13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 FOXI2Q6ZQN5 318 aa13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 SAV1Q9H4B6 383 aaPredicted RBP13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 RPRMQ9NS64 109 aa13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 OR5AC2Q9NZP5 309 aa13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 RNF24Q9Y225 148 aa13.52□□□□□ -0.25
CDKN1A-206ENST00000462537 H2BFSP57053 126 aa13.51□□□□□ -0.25
CDKN1A-206ENST00000462537 VWC2Q2TAL6 325 aa13.51□□□□□ -0.25
CDKN1A-206ENST00000462537 EBLN2Q6P2I7 272 aa13.51□□□□□ -0.25
CDKN1A-206ENST00000462537 LINC00305Q7Z4B0 112 aa13.51□□□□□ -0.25
CDKN1A-206ENST00000462537 OR4B1Q8NGF8 309 aa13.51□□□□□ -0.25
CDKN1A-206ENST00000462537 C1QTNF4Q9BXJ3 329 aa13.51□□□□□ -0.25
CDKN1A-206ENST00000462537 SLC25A31Q9H0C2 315 aa13.51□□□□□ -0.25
CDKN1A-206ENST00000462537 WDR83OSQ9Y284 106 aa13.51□□□□□ -0.25
CDKN1A-206ENST00000462537 CSMD3Q7Z407 3707 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 CXorf65A6NEN9 183 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 FGF7P21781 194 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 NHLH2Q02577 135 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 ATP6V1FQ16864 119 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 C10orf113Q5VZT2 155 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 MIC13Q5XKP0 118 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 IGFL4Q6B9Z1 124 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 Q6ZRG5 221 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 LRRC20Q8TCA0 184 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 PPP1R1CQ8WVI7 109 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 C20orf173Q96LM9 149 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 C17orf77Q96MU5 243 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 XCL2Q9UBD3 114 aa13.5□□□□□ -0.25
CDKN1A-206ENST00000462537 KMT2CQ8NEZ4 4911 aaKnown RBP13.49□□□□□ -0.25
CDKN1A-206ENST00000462537 F6UB75 175 aa13.49□□□□□ -0.25
CDKN1A-206ENST00000462537 DEFB4AO15263 64 aa13.49□□□□□ -0.25
CDKN1A-206ENST00000462537 PTTG1O95997 202 aa13.49□□□□□ -0.25
CDKN1A-206ENST00000462537 ELOA3CA0A087WX78 387 aaPredicted RBP13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 PET100P0DJ07 73 aa13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 FXYD7P58549 80 aa13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 SPATA31B1PQ5VZV4 182 aa13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 RNF182Q8N6D2 247 aa13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 OR5C1Q8NGR4 320 aa13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 OR1L4Q8NGR5 311 aa13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 C11orf68Q9H3H3 251 aaKnown RBP13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 ALG5Q9Y673 324 aa13.48□□□□□ -0.25
CDKN1A-206ENST00000462537 A0A0J9YX75 114 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 H0YIZ8 118 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 B2MP61769 119 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 PRR20EP86478 221 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 PRR20CP86479 221 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 PRR20DP86480 221 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 PRR20BP86481 221 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 PRR20AP86496 221 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 OPCMLQ14982 345 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 FAM78BQ5VT40 261 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 BPIFA4PQ86YQ2 179 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 TMEM37Q8WXS4 190 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 PFDN5Q99471 154 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 DNAJC4Q9NNZ3 241 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 SLC39A9Q9NUM3 307 aa13.47□□□□□ -0.25
CDKN1A-206ENST00000462537 A0A087X0K7 114 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 TRAV8-2A0A0B4J237 113 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 MPDU1O75352 247 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 MPC2O95563 127 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 MIFP14174 115 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 RPL29P47914 159 aaKnown RBP13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 CLINT1Q14677 625 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 CSNK1G2-AS1Q8NCQ2 148 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 ZNF738Q8NE65 137 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 THAP6Q8TBB0 222 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 PXMP4Q9Y6I8 212 aa13.46□□□□□ -0.25
CDKN1A-206ENST00000462537 STARD9Q9P2P6 4700 aa13.46□□□□□ -0.26
CDKN1A-206ENST00000462537 IGHV4-28A0A0C4DH34 117 aa13.45□□□□□ -0.26
CDKN1A-206ENST00000462537 SNRPCP09234 159 aaKnown RBP13.45□□□□□ -0.26
CDKN1A-206ENST00000462537 PSG9Q00887 426 aa13.45□□□□□ -0.26
CDKN1A-206ENST00000462537 Q8NAQ8 132 aa13.45□□□□□ -0.26
CDKN1A-206ENST00000462537 C11orf45Q8TAV5 145 aa13.45□□□□□ -0.26
CDKN1A-206ENST00000462537 NUPR2A6NF83 97 aa13.44□□□□□ -0.26
CDKN1A-206ENST00000462537 ZNF705EA8MWA4 302 aaPredicted RBP13.44□□□□□ -0.26
CDKN1A-206ENST00000462537 MRPS12O15235 138 aaKnown RBP13.44□□□□□ -0.26
CDKN1A-206ENST00000462537 MORN5Q5VZ52 161 aa13.44□□□□□ -0.26
CDKN1A-206ENST00000462537 LCN15Q6UWW0 184 aa13.44□□□□□ -0.26
CDKN1A-206ENST00000462537 CLUHP3Q96NS8 147 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms