RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 RSG1Q9BU20 258 aa11.63□□□□□ -0.55
ERCC3-206ENST00000462306 ARV1Q9H2C2 271 aa11.63□□□□□ -0.55
ERCC3-206ENST00000462306 SPRY2O43597 315 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 PSMB3P49720 205 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 FCN2Q15485 313 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 OR11H7Q8NGC8 314 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 MUC7Q8TAX7 377 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 TMEM37Q8WXS4 190 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 AGRNO00468 2067 aa11.62□□□□□ -0.55
ERCC3-206ENST00000462306 DNAH7Q8WXX0 4024 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 ISLRO14498 428 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 GIG44P09565 113 aaPredicted RBP11.61□□□□□ -0.55
ERCC3-206ENST00000462306 PET100P0DJ07 73 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 RPL7P18124 248 aaKnown RBP11.61□□□□□ -0.55
ERCC3-206ENST00000462306 FGF7P21781 194 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 ID1P41134 155 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 RPL29P47914 159 aaKnown RBP11.61□□□□□ -0.55
ERCC3-206ENST00000462306 MEOX2P50222 304 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 BAXQ07812 192 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 OPCMLQ14982 345 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 LINC00305Q7Z4B0 112 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 S100A7AQ86SG5 101 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 MED28Q9H204 178 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 MBD2Q9UBB5 411 aa11.61□□□□□ -0.55
ERCC3-206ENST00000462306 ELOA3CA0A087WX78 387 aaPredicted RBP11.6□□□□□ -0.55
ERCC3-206ENST00000462306 MRPS12O15235 138 aaKnown RBP11.6□□□□□ -0.55
ERCC3-206ENST00000462306 COX7A2P2O60397 106 aa11.6□□□□□ -0.55
ERCC3-206ENST00000462306 LYL1P12980 280 aa11.6□□□□□ -0.55
ERCC3-206ENST00000462306 DEFB1P60022 68 aa11.6□□□□□ -0.55
ERCC3-206ENST00000462306 OXA1LQ15070 435 aa11.6□□□□□ -0.55
ERCC3-206ENST00000462306 SAMD13Q5VXD3 122 aa11.6□□□□□ -0.55
ERCC3-206ENST00000462306 MORN5Q5VZ52 161 aa11.6□□□□□ -0.55
ERCC3-206ENST00000462306 LINC00052Q96N35 136 aa11.6□□□□□ -0.55
ERCC3-206ENST00000462306 H3BMM0 161 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 C3orf84H3BNL1 204 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 MPDU1O75352 247 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
ERCC3-206ENST00000462306 B2MP61769 119 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 CLINT1Q14677 625 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 GDF5OSQ5U4N7 250 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 C10orf113Q5VZT2 155 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 Q6ZRG5 221 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 C20orf173Q96LM9 149 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 NPCDR1Q9BY65 106 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 DNAJC4Q9NNZ3 241 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 SLC39A9Q9NUM3 307 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 HSPB11Q9Y547 144 aa11.59□□□□□ -0.55
ERCC3-206ENST00000462306 A0A087X0K7 114 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 TRAV8-2A0A0B4J237 113 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 SPP1P10451 314 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 HLA-DRB4P13762 266 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 ATF4P18848 351 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-206ENST00000462306 C4BPBP20851 252 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 RPL12P30050 165 aaKnown RBP11.58□□□□□ -0.56
ERCC3-206ENST00000462306 MORN3Q6PF18 240 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-206ENST00000462306 THAP6Q8TBB0 222 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 GATAD1Q8WUU5 269 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 SAV1Q9H4B6 383 aaPredicted RBP11.58□□□□□ -0.56
ERCC3-206ENST00000462306 RNF24Q9Y225 148 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 HLA-DRB4X5D2U9 266 aa11.58□□□□□ -0.56
ERCC3-206ENST00000462306 FOXI2Q6ZQN5 318 aa11.57□□□□□ -0.56
ERCC3-206ENST00000462306 OR1L4Q8NGR5 311 aa11.57□□□□□ -0.56
ERCC3-206ENST00000462306 WDR61Q9GZS3 305 aaKnown RBP11.57□□□□□ -0.56
ERCC3-206ENST00000462306 F6UB75 175 aa11.56□□□□□ -0.56
ERCC3-206ENST00000462306 FGL1Q08830 312 aa11.56□□□□□ -0.56
ERCC3-206ENST00000462306 TMEM41BQ5BJD5 291 aa11.56□□□□□ -0.56
ERCC3-206ENST00000462306 IGFL4Q6B9Z1 124 aa11.56□□□□□ -0.56
ERCC3-206ENST00000462306 PFDN5Q99471 154 aa11.56□□□□□ -0.56
ERCC3-206ENST00000462306 ATP5SQ99766 215 aa11.56□□□□□ -0.56
ERCC3-206ENST00000462306 RPRMQ9NS64 109 aa11.56□□□□□ -0.56
ERCC3-206ENST00000462306 TRAV5A0A0B4J249 113 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 A0A0J9YWU9 116 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 A0A0J9YX75 114 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 GIPP09681 153 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-206ENST00000462306 Q5BKY6 102 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 GCSAMLQ5JQS6 135 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 CASC10Q5T4H9 136 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 SPATA31B1PQ5VZV4 182 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 BPIFA4PQ86YQ2 179 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 RNF182Q8N6D2 247 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 CSNK1G2-AS1Q8NCQ2 148 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 CLUHP3Q96NS8 147 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 RARRES2Q99969 163 aa11.55□□□□□ -0.56
ERCC3-206ENST00000462306 OR11H2Q8NH07 326 aa11.54□□□□□ -0.56
ERCC3-206ENST00000462306 ASB13Q8WXK3 278 aa11.54□□□□□ -0.56
ERCC3-206ENST00000462306 SMIM3Q9BZL3 60 aa11.54□□□□□ -0.56
ERCC3-206ENST00000462306 WFDC1Q9HC57 220 aa11.54□□□□□ -0.56
ERCC3-206ENST00000462306 IGKV3-20P01619 116 aa11.53□□□□□ -0.56
ERCC3-206ENST00000462306 SNRPCP09234 159 aaKnown RBP11.53□□□□□ -0.56
ERCC3-206ENST00000462306 IGLC2P0DOY2 106 aa11.53□□□□□ -0.56
ERCC3-206ENST00000462306 CXCL2P19875 107 aa11.53□□□□□ -0.56
ERCC3-206ENST00000462306 HLA-DMBP28068 263 aa11.53□□□□□ -0.56
ERCC3-206ENST00000462306 NUTF2P61970 127 aaKnown RBP11.53□□□□□ -0.56
ERCC3-206ENST00000462306 FAM78BQ5VT40 261 aa11.53□□□□□ -0.56
ERCC3-206ENST00000462306 EBLN2Q6P2I7 272 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms