RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SSBP2P81877 361 aaPredicted RBP12.42□□□□□ -0.42
LMNB1-203ENST00000460265 WT1-ASQ06250 92 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 IGHV3-35A0A0C4DH35 117 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 G3V4G9 280 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 CA1P00915 261 aaPredicted RBP12.42□□□□□ -0.42
LMNB1-203ENST00000460265 C5orf17Q8NAS9 161 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 NAA38Q9BRA0 125 aaKnown RBP12.42□□□□□ -0.42
LMNB1-203ENST00000460265 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
LMNB1-203ENST00000460265 IGKV1OR2-108A0A075B7D4 117 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 IGLC1P0CG04 106 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 PLP1P60201 277 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 LINC00305Q7Z4B0 112 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 PDPNQ86YL7 162 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 CAMPP49913 170 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 CX3CL1P78423 397 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 CR1LQ2VPA4 569 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 EAF1Q96JC9 268 aaPredicted RBP12.41□□□□□ -0.42
LMNB1-203ENST00000460265 TMEM70Q9BUB7 260 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 SNAI2O43623 268 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 AMY1AP04745 511 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 KLRD1Q13241 179 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 VWC2Q2TAL6 325 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 C3orf36Q3SXR2 165 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 COX19Q49B96 90 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 TPPP3Q9BW30 176 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 ZNF257Q9Y2Q1 563 aa12.41□□□□□ -0.42
LMNB1-203ENST00000460265 KLRB1Q12918 225 aa12.4□□□□□ -0.42
LMNB1-203ENST00000460265 SCGB2A2Q13296 93 aa12.4□□□□□ -0.42
LMNB1-203ENST00000460265 POLQO75417 2590 aa12.4□□□□□ -0.42
LMNB1-203ENST00000460265 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
LMNB1-203ENST00000460265 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
LMNB1-203ENST00000460265 PGPA6NDG6 321 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 KLF17Q5JT82 389 aaPredicted RBP12.39□□□□□ -0.43
LMNB1-203ENST00000460265 TXNDC17Q9BRA2 123 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 V9GYV3 84 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 IGHV3OR16-8A0A075B7F1 116 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 LGALS7P47929 136 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 GNG5P63218 68 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 OR5AN1Q8NGI8 311 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 CHODLQ9H9P2 273 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 ST20Q9HBF5 79 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 AMMECR1Q9Y4X0 333 aaPredicted RBP12.39□□□□□ -0.43
LMNB1-203ENST00000460265 A0A1W2PPI3 338 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 OR1L4Q8NGR5 311 aa12.39□□□□□ -0.43
LMNB1-203ENST00000460265 DAZAP1Q96EP5 407 aaKnown RBP12.39□□□□□ -0.43
LMNB1-203ENST00000460265 C2orf83Q53S99 150 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 ZNF833PQ6ZTB9 187 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 LSM4Q9Y4Z0 139 aaKnown RBP12.38□□□□□ -0.43
LMNB1-203ENST00000460265 PKD1L2Q7Z442 2459 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 HTR1DP28221 377 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 TMEM155Q4W5P6 130 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 MORN5Q5VZ52 161 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 H3BUT2 72 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 GPR6P46095 362 aaPredicted RBP12.38□□□□□ -0.43
LMNB1-203ENST00000460265 PPP1R27Q86WC6 154 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 NDUFA4L2Q9NRX3 87 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 MSRB2Q9Y3D2 182 aa12.38□□□□□ -0.43
LMNB1-203ENST00000460265 SPENQ96T58 3664 aaKnown RBP12.37□□□□□ -0.43
LMNB1-203ENST00000460265 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
LMNB1-203ENST00000460265 TIMM23O14925 209 aa12.37□□□□□ -0.43
LMNB1-203ENST00000460265 NDUFS7O75251 213 aa12.37□□□□□ -0.43
LMNB1-203ENST00000460265 IGHV3-23P01764 117 aa12.37□□□□□ -0.43
LMNB1-203ENST00000460265 LIPFP07098 398 aa12.37□□□□□ -0.43
LMNB1-203ENST00000460265 TMEM30BQ3MIR4 351 aa12.37□□□□□ -0.43
LMNB1-203ENST00000460265 IBA57Q5T440 356 aaKnown RBP12.37□□□□□ -0.43
LMNB1-203ENST00000460265 AZU1P20160 251 aa12.37□□□□□ -0.43
LMNB1-203ENST00000460265 SLAQ13239 276 aa12.37□□□□□ -0.43
LMNB1-203ENST00000460265 USP9XQ93008 2570 aaPredicted RBP12.37□□□□□ -0.43
LMNB1-203ENST00000460265 LRRK2Q5S007 2527 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 MFAP2P55001 183 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 TMEM177Q53S58 311 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 TMEM167AQ8TBQ9 72 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 RASL11BQ9BPW5 248 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 IGHV1-3A0A0C4DH29 117 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 GPR183P32249 361 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 PET117Q6UWS5 81 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 MCRIP2Q9BUT9 160 aaKnown RBP12.36□□□□□ -0.43
LMNB1-203ENST00000460265 TMEM191AQ9H0A3 160 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 UCNP55089 124 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 CDSNQ15517 529 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 CACNG8Q8WXS5 425 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
LMNB1-203ENST00000460265 SH2D7A6NKC9 451 aaPredicted RBP12.35□□□□□ -0.43
LMNB1-203ENST00000460265 Q8N7P7 452 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 SRSF12Q8WXF0 261 aaKnown RBP12.35□□□□□ -0.43
LMNB1-203ENST00000460265 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 ASH1LQ9NR48 2969 aaKnown RBP12.35□□□□□ -0.43
LMNB1-203ENST00000460265 SSX8Q7RTT4 187 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 MRPL36Q9P0J6 103 aaKnown RBP12.35□□□□□ -0.43
LMNB1-203ENST00000460265 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 RAI1Q7Z5J4 1906 aaPredicted RBP12.35□□□□□ -0.43
LMNB1-203ENST00000460265 IGHV3OR16-10A0A075B7F0 116 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 FBLL1A6NHQ2 334 aaKnown RBP12.35□□□□□ -0.43
LMNB1-203ENST00000460265 PRR20EP86478 221 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 PRR20CP86479 221 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 PRR20DP86480 221 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 PRR20BP86481 221 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 PRR20AP86496 221 aa12.35□□□□□ -0.43
LMNB1-203ENST00000460265 C22orf46C9J442 243 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 HIST1H1AQ02539 215 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms