RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 FXYD7P58549 80 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 RAP2BP61225 183 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 EBLN2Q6P2I7 272 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 OR4B1Q8NGF8 309 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 SLC35B3Q9H1N7 401 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 CELA1Q9UNI1 258 aa13.64□□□□□ -0.23
COL5A1-203ENST00000460264 ZNF705FA8MVS1 300 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-203ENST00000460264 FAM25EA8MYX2 175 aa13.63□□□□□ -0.23
COL5A1-203ENST00000460264 C11orf94C9JXX5 98 aa13.63□□□□□ -0.23
COL5A1-203ENST00000460264 H2AFB2P0C5Z0 115 aa13.63□□□□□ -0.23
COL5A1-203ENST00000460264 ZNF705DP0CH99 300 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-203ENST00000460264 ZNF705BP0CI00 300 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-203ENST00000460264 SLC38A11Q08AI6 406 aa13.63□□□□□ -0.23
COL5A1-203ENST00000460264 FAM78BQ5VT40 261 aa13.63□□□□□ -0.23
COL5A1-203ENST00000460264 TEPPQ6URK8 271 aa13.63□□□□□ -0.23
COL5A1-203ENST00000460264 UHRF2Q96PU4 802 aa13.63□□□□□ -0.23
COL5A1-203ENST00000460264 OR5G3P0C626 314 aa13.62□□□□□ -0.23
COL5A1-203ENST00000460264 PSG9Q00887 426 aa13.62□□□□□ -0.23
COL5A1-203ENST00000460264 LGALS9CQ6DKI2 356 aa13.62□□□□□ -0.23
COL5A1-203ENST00000460264 Q6ZTC4 211 aa13.62□□□□□ -0.23
COL5A1-203ENST00000460264 C12orf45Q8N5I9 185 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-203ENST00000460264 S100ZQ8WXG8 99 aa13.62□□□□□ -0.23
COL5A1-203ENST00000460264 NEU1Q99519 415 aa13.62□□□□□ -0.23
COL5A1-203ENST00000460264 GGACTQ9BVM4 153 aa13.62□□□□□ -0.23
COL5A1-203ENST00000460264 ARL6Q9H0F7 186 aa13.62□□□□□ -0.23
COL5A1-203ENST00000460264 LSM5Q9Y4Y9 91 aaKnown RBP13.62□□□□□ -0.23
COL5A1-203ENST00000460264 TRAV8-2A0A0B4J237 113 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 C5orf51A6NDU8 294 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 A8MTW9 85 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 L7N2F9 121 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 RPL7P18124 248 aaKnown RBP13.61□□□□□ -0.23
COL5A1-203ENST00000460264 TCTAP57738 103 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 VAMP2P63027 116 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 ASAH1Q13510 395 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 ZNF546Q86UE3 836 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 C11orf1Q9H5F2 150 aa13.61□□□□□ -0.23
COL5A1-203ENST00000460264 TRAV10A0A0B4J240 114 aa13.6□□□□□ -0.23
COL5A1-203ENST00000460264 DEDDO75618 318 aa13.6□□□□□ -0.23
COL5A1-203ENST00000460264 MZT2BQ6NZ67 158 aa13.6□□□□□ -0.23
COL5A1-203ENST00000460264 PATE2Q6UY27 113 aa13.6□□□□□ -0.23
COL5A1-203ENST00000460264 C2orf50Q96LR7 162 aa13.6□□□□□ -0.23
COL5A1-203ENST00000460264 IGHV3OR16-12A0A075B7B8 117 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 SMIM9A6NGZ8 99 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 IGLL5B9A064 214 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 GOSR2O14653 212 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 AGPAT2O15120 278 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 FGL1Q08830 312 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 C12orf74Q32Q52 190 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 PXDC1Q5TGL8 231 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 IGFL4Q6B9Z1 124 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 AMTNQ6UX39 209 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 S100A7AQ86SG5 101 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 RNF182Q8N6D2 247 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 MGST2Q99735 147 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 ARV1Q9H2C2 271 aa13.59□□□□□ -0.23
COL5A1-203ENST00000460264 A0A087X0K7 114 aa13.58□□□□□ -0.24
COL5A1-203ENST00000460264 BCAP31P51572 246 aa13.58□□□□□ -0.24
COL5A1-203ENST00000460264 CAV2P51636 162 aa13.58□□□□□ -0.24
COL5A1-203ENST00000460264 ZNF767PQ75MW2 155 aa13.58□□□□□ -0.24
COL5A1-203ENST00000460264 RPP25LQ8N5L8 163 aaKnown RBP13.58□□□□□ -0.24
COL5A1-203ENST00000460264 APLNQ9ULZ1 77 aa13.58□□□□□ -0.24
COL5A1-203ENST00000460264 GOLT1BQ9Y3E0 138 aa13.58□□□□□ -0.24
COL5A1-203ENST00000460264 TMEM189A5PLL7 270 aa13.57□□□□□ -0.24
COL5A1-203ENST00000460264 CST7O76096 145 aa13.57□□□□□ -0.24
COL5A1-203ENST00000460264 CNN1P51911 297 aaKnown RBP13.57□□□□□ -0.24
COL5A1-203ENST00000460264 IL15RAQ13261 267 aa13.57□□□□□ -0.24
COL5A1-203ENST00000460264 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
COL5A1-203ENST00000460264 RFNGQ9Y644 331 aa13.57□□□□□ -0.24
COL5A1-203ENST00000460264 KMT2AQ03164 3969 aa13.56□□□□□ -0.24
COL5A1-203ENST00000460264 FAM24AA6NFZ4 105 aa13.56□□□□□ -0.24
COL5A1-203ENST00000460264 A6NHS1 94 aa13.56□□□□□ -0.24
COL5A1-203ENST00000460264 MRPS12O15235 138 aaKnown RBP13.56□□□□□ -0.24
COL5A1-203ENST00000460264 PVALBP20472 110 aaPredicted RBP13.56□□□□□ -0.24
COL5A1-203ENST00000460264 S100A10P60903 97 aa13.56□□□□□ -0.24
COL5A1-203ENST00000460264 ZNF738Q8NE65 137 aa13.56□□□□□ -0.24
COL5A1-203ENST00000460264 RNF24Q9Y225 148 aa13.56□□□□□ -0.24
COL5A1-203ENST00000460264 UPK1BO75841 260 aa13.55□□□□□ -0.24
COL5A1-203ENST00000460264 DUSP14O95147 198 aaKnown RBP13.55□□□□□ -0.24
COL5A1-203ENST00000460264 CXCL3P19876 107 aa13.55□□□□□ -0.24
COL5A1-203ENST00000460264 EMP1P54849 157 aa13.55□□□□□ -0.24
COL5A1-203ENST00000460264 RAB32Q13637 225 aa13.55□□□□□ -0.24
COL5A1-203ENST00000460264 LINC00305Q7Z4B0 112 aa13.55□□□□□ -0.24
COL5A1-203ENST00000460264 OR11H7Q8NGC8 314 aa13.55□□□□□ -0.24
COL5A1-203ENST00000460264 IGF2BP2-AS1Q96M15 143 aa13.55□□□□□ -0.24
COL5A1-203ENST00000460264 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-203ENST00000460264 PTTG2Q9NZH5 202 aa13.55□□□□□ -0.24
COL5A1-203ENST00000460264 IGHV4-4A0A075B6R2 117 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 DEFB131BA0A096LNP1 70 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 COX7A2P2O60397 106 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 HBE1P02100 147 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 SPART-AS1P0CW21 52 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 CAMLGP49069 296 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 SPINK13Q1W4C9 94 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 VWC2Q2TAL6 325 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 ENKURQ8TC29 256 aa13.54□□□□□ -0.24
COL5A1-203ENST00000460264 RNF126Q9BV68 326 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms