RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LGALS7P47929 136 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 TMEM75Q8N9X5 138 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 ENSAO43768 121 aaKnown RBP10.92□□□□□ -0.66
PTPRE-204ENST00000455661 FAM106CPP0CH98 169 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 FABP2P12104 132 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 RPL27AP46776 148 aaKnown RBP10.92□□□□□ -0.66
PTPRE-204ENST00000455661 DIAPH2-AS1Q14236 149 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 ADAMTSL5Q6ZMM2 481 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 ZNF493Q6ZR52 646 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 SLC25A39Q9BZJ4 359 aaPredicted RBP10.92□□□□□ -0.66
PTPRE-204ENST00000455661 TPSG1Q9NRR2 321 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 SELENOKQ9Y6D0 94 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 A0A096LNJ9 63 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 D6R8Y8 96 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 HBDP02042 147 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 WFDC8Q8IUA0 241 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 ZNF414Q96IQ9 312 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 PRELID3AQ96N28 172 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 NPFFR1Q9GZQ6 430 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 NMUP48645 174 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 TCTAP57738 103 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 LOXL1Q08397 574 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-204ENST00000455661 TMEM200BQ69YZ2 307 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 LINC00311Q8N616 119 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 PSG8Q9UQ74 426 aa10.91□□□□□ -0.66
PTPRE-204ENST00000455661 TMEM11P17152 192 aa10.9□□□□□ -0.66
PTPRE-204ENST00000455661 CCL11P51671 97 aa10.9□□□□□ -0.66
PTPRE-204ENST00000455661 C3orf36Q3SXR2 165 aa10.9□□□□□ -0.66
PTPRE-204ENST00000455661 ORMDL3Q8N138 153 aa10.9□□□□□ -0.66
PTPRE-204ENST00000455661 NBEAQ8NFP9 2946 aa10.9□□□□□ -0.66
PTPRE-204ENST00000455661 SMIM13P0DJ93 91 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 APELAP0DMC3 54 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 CT45A10P0DMU9 189 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 RBPJQ06330 500 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 C8orf31Q8N9H6 132 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 SCNM1Q9BWG6 230 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 U3KQK5 164 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 VPS13AQ96RL7 3174 aa10.9□□□□□ -0.67
PTPRE-204ENST00000455661 ZNF785A8K8V0 405 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 PSG3Q16557 428 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 Q71RC1 249 aaPredicted RBP10.89□□□□□ -0.67
PTPRE-204ENST00000455661 NGBQ9NPG2 151 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 KNTC1P50748 2209 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 NAV3Q8IVL0 2385 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 MRGPRG-AS1Q2M3A8 158 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 SAMD13Q5VXD3 122 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 FAM104BQ5XKR9 115 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 C1orf210Q8IVY1 113 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 ABHD17AQ96GS6 310 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 RITA1Q96K30 269 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 RASL11BQ9BPW5 248 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 INSIG2Q9Y5U4 225 aa10.89□□□□□ -0.67
PTPRE-204ENST00000455661 TRBV19A0A075B6N1 114 aa10.88□□□□□ -0.67
PTPRE-204ENST00000455661 RBP4P02753 201 aa10.88□□□□□ -0.67
PTPRE-204ENST00000455661 PSMG4Q5JS54 123 aa10.88□□□□□ -0.67
PTPRE-204ENST00000455661 LYPD1Q8N2G4 141 aa10.88□□□□□ -0.67
PTPRE-204ENST00000455661 INTS1Q8N201 2190 aaKnown RBP10.88□□□□□ -0.67
PTPRE-204ENST00000455661 TRAV17A0A0B4J275 112 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 RPL24P83731 157 aaKnown RBP10.87□□□□□ -0.67
PTPRE-204ENST00000455661 LYZL1Q6UWQ5 148 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 PCP2Q8IVA1 136 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 ARRDC1-AS1Q9H2J1 176 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 F11RQ9Y624 299 aaKnown RBP10.87□□□□□ -0.67
PTPRE-204ENST00000455661 COL6A3P12111 3177 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 TMEM189A5PLL7 270 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 CRIP1P50238 77 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 CCL8P80075 99 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 AMN1Q8IY45 258 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 FDCSPQ8NFU4 85 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 ASCL2Q99929 193 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 ARFGEF3Q5TH69 2177 aa10.87□□□□□ -0.67
PTPRE-204ENST00000455661 IGHV3-72A0A0B4J1Y9 119 aa10.86□□□□□ -0.67
PTPRE-204ENST00000455661 MBD3L4A6NDZ8 208 aaPredicted RBP10.86□□□□□ -0.67
PTPRE-204ENST00000455661 MBD3L3A6NE82 208 aaPredicted RBP10.86□□□□□ -0.67
PTPRE-204ENST00000455661 MBD3L5A6NJ08 208 aaPredicted RBP10.86□□□□□ -0.67
PTPRE-204ENST00000455661 NDUFB3O43676 98 aa10.86□□□□□ -0.67
PTPRE-204ENST00000455661 FXYD7P58549 80 aa10.86□□□□□ -0.67
PTPRE-204ENST00000455661 ZNF474Q6S9Z5 364 aaPredicted RBP10.86□□□□□ -0.67
PTPRE-204ENST00000455661 PRSS57Q6UWY2 283 aa10.86□□□□□ -0.67
PTPRE-204ENST00000455661 DHRS13Q6UX07 377 aa10.86□□□□□ -0.67
PTPRE-204ENST00000455661 MBD3L2Q8NHZ7 208 aaPredicted RBP10.86□□□□□ -0.67
PTPRE-204ENST00000455661 CACNA1GO43497 2377 aa10.86□□□□□ -0.67
PTPRE-204ENST00000455661 TMEM213A2RRL7 107 aa10.86□□□□□ -0.67
PTPRE-204ENST00000455661 TMEM133Q9H2Q1 129 aa10.86□□□□□ -0.67
PTPRE-204ENST00000455661 NDUFS7O75251 213 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 GCSHP23434 173 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 CKS2P33552 79 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 MRPL51Q4U2R6 128 aaKnown RBP10.85□□□□□ -0.67
PTPRE-204ENST00000455661 SIGLEC15Q6ZMC9 328 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 C17orf77Q96MU5 243 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 SHANK2-AS3Q9BTD1 123 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 CADP27708 2225 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 PPIAL4EA0A075B759 164 aa10.85□□□□□ -0.67
PTPRE-204ENST00000455661 K7EM74 188 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms