RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 COMMD3Q9UBI1 195 aa11.74□□□□□ -0.53
UBE2D4-209ENST00000454428 ZNF493Q6ZR52 646 aa11.73□□□□□ -0.53
UBE2D4-209ENST00000454428 Q6ZSN1 163 aa11.73□□□□□ -0.53
UBE2D4-209ENST00000454428 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
UBE2D4-209ENST00000454428 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
UBE2D4-209ENST00000454428 TMEM263Q8WUH6 116 aaKnown RBP11.73□□□□□ -0.53
UBE2D4-209ENST00000454428 RBKSQ9H477 322 aa11.73□□□□□ -0.53
UBE2D4-209ENST00000454428 HSPB7Q9UBY9 170 aa11.73□□□□□ -0.53
UBE2D4-209ENST00000454428 A0A087WTM6 91 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 A0A096LPF7 62 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 SMIM31A0A1B0GVY4 71 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 FAM229AH3BQW9 127 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 EREGO14944 169 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 PRB4P10163 310 aaPredicted RBP11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 LSM3P62310 102 aaKnown RBP11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 THAP8Q8NA92 274 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 OR52I2Q8NH67 350 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 VSIG2Q96IQ7 327 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 SLC35E1Q96K37 410 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 TMEM56-RWDD3S4R434 201 aa11.72□□□□□ -0.53
UBE2D4-209ENST00000454428 HPGDSO60760 199 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 IFNA5P01569 189 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 SULT1A3P0DMM9 295 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 SULT1A4P0DMN0 295 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 KIR3DS1Q14943 382 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 SCGB2B2Q4G0G5 96 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 TMEM182Q6ZP80 229 aaPredicted RBP11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 OR4D5Q8NGN0 318 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 PRR13Q9NZ81 148 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 MTFP1Q9UDX5 166 aa11.71□□□□□ -0.53
UBE2D4-209ENST00000454428 GAGE12BA1L429 117 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 CRYM-AS1A6NIL9 109 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 SIVA1O15304 175 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 GAGE7O76087 117 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 FABP1P07148 127 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 ZNF182P17025 639 aaPredicted RBP11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 TBPP20226 339 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 HIST1H1AQ02539 215 aaPredicted RBP11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 ZNF738Q8NE65 137 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 OR8A1Q8NGG7 326 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 SLC45A2Q9UMX9 530 aa11.7□□□□□ -0.54
UBE2D4-209ENST00000454428 GABARAPH6UMI1 98 aa11.69□□□□□ -0.54
UBE2D4-209ENST00000454428 GABARAPO95166 117 aa11.69□□□□□ -0.54
UBE2D4-209ENST00000454428 GATA2P23769 480 aaPredicted RBP11.69□□□□□ -0.54
UBE2D4-209ENST00000454428 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
UBE2D4-209ENST00000454428 TMPRSS5Q9H3S3 457 aa11.69□□□□□ -0.54
UBE2D4-209ENST00000454428 KRTAP29-1A8MX34 341 aaPredicted RBP11.68□□□□□ -0.54
UBE2D4-209ENST00000454428 GCSHP23434 173 aa11.68□□□□□ -0.54
UBE2D4-209ENST00000454428 RHOBP62745 196 aa11.68□□□□□ -0.54
UBE2D4-209ENST00000454428 FAAP20Q6NZ36 180 aa11.68□□□□□ -0.54
UBE2D4-209ENST00000454428 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
UBE2D4-209ENST00000454428 H7BYZ3 331 aa11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 TNFAIP8O95379 198 aa11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 ORM2P19652 201 aa11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 CDKN1BP46527 198 aa11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 ATP5IP56385 69 aaPredicted RBP11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 FGL1Q08830 312 aa11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 TMEM229BQ8NBD8 167 aa11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 GPR82Q96P67 336 aa11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 C14orf166Q9Y224 244 aaKnown RBP11.67□□□□□ -0.54
UBE2D4-209ENST00000454428 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 ADAP1O75689 374 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 NXPH4O95158 308 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 RAB3DO95716 219 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 CFDP00746 253 aaPredicted RBP11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 CXCL3P19876 107 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 CCR6P51684 374 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 SMCO1Q147U7 214 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 GGNBP1Q5YKI7 109 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 STEAP1BQ6NZ63 245 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 IL22RA2Q969J5 263 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
UBE2D4-209ENST00000454428 H3BRN7 92 aa11.65□□□□□ -0.54
UBE2D4-209ENST00000454428 RLN2P04090 185 aa11.65□□□□□ -0.54
UBE2D4-209ENST00000454428 Q6ZTI0 123 aa11.65□□□□□ -0.54
UBE2D4-209ENST00000454428 LYZL2Q7Z4W2 148 aa11.65□□□□□ -0.54
UBE2D4-209ENST00000454428 TMED4Q7Z7H5 227 aa11.65□□□□□ -0.54
UBE2D4-209ENST00000454428 PARD6GQ9BYG4 376 aaPredicted RBP11.65□□□□□ -0.54
UBE2D4-209ENST00000454428 PKHD1L1Q86WI1 4243 aa11.64□□□□□ -0.55
UBE2D4-209ENST00000454428 TAS2R19P59542 299 aa11.64□□□□□ -0.55
UBE2D4-209ENST00000454428 PSG3Q16557 428 aa11.64□□□□□ -0.55
UBE2D4-209ENST00000454428 PPP1R14DQ9NXH3 145 aa11.64□□□□□ -0.55
UBE2D4-209ENST00000454428 NCS1P62166 190 aa11.63□□□□□ -0.55
UBE2D4-209ENST00000454428 SURF2Q15527 256 aaPredicted RBP11.63□□□□□ -0.55
UBE2D4-209ENST00000454428 GFI1BQ5VTD9 330 aa11.63□□□□□ -0.55
UBE2D4-209ENST00000454428 NFE4Q86UQ8 179 aa11.63□□□□□ -0.55
UBE2D4-209ENST00000454428 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
UBE2D4-209ENST00000454428 SHANK2-AS3Q9BTD1 123 aa11.63□□□□□ -0.55
UBE2D4-209ENST00000454428 TMEM70Q9BUB7 260 aa11.63□□□□□ -0.55
UBE2D4-209ENST00000454428 TMEM147Q9BVK8 224 aa11.63□□□□□ -0.55
UBE2D4-209ENST00000454428 A0A087X0K7 114 aa11.62□□□□□ -0.55
UBE2D4-209ENST00000454428 A0A0B4J2A0 478 aa11.62□□□□□ -0.55
UBE2D4-209ENST00000454428 IAPPP10997 89 aa11.62□□□□□ -0.55
UBE2D4-209ENST00000454428 BPIFCQ8NFQ6 507 aa11.62□□□□□ -0.55
UBE2D4-209ENST00000454428 RPUSD4Q96CM3 377 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms