RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TAF9BQ9HBM6 251 aa2.85□□□□□ -1.95
LINC00393-202ENST00000452852 PARP11Q9NR21 331 aa2.85□□□□□ -1.95
LINC00393-202ENST00000452852 JPT1Q9UK76 154 aa2.85□□□□□ -1.95
LINC00393-202ENST00000452852 LRRC42Q9Y546 428 aa2.85□□□□□ -1.95
LINC00393-202ENST00000452852 SACSQ9NZJ4 4579 aa2.85□□□□□ -1.95
LINC00393-202ENST00000452852 TRAV8-6A0A0B4J262 113 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 TRAV41A0A0B4J266 112 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 PNMA8CA0A1B0GUJ8 204 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 ZNF736B4DX44 427 aaPredicted RBP2.84□□□□□ -1.95
LINC00393-202ENST00000452852 KRBOX1C9JBD0 128 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 OVOL1O14753 267 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 MYL12BO14950 172 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 PDCD6O75340 191 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 HLA-DRB1P01911 266 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 MAS1P04201 325 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 UBBP0CG47 229 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 LIMS3P0CW19 117 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 LIMS4P0CW20 117 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 PSMB8P28062 276 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 ACTBP60709 375 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 TSPAN5P62079 268 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 PITPNAQ00169 270 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 TMEM267Q0VDI3 215 aaPredicted RBP2.84□□□□□ -1.95
LINC00393-202ENST00000452852 MORN2Q502X0 79 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 XAF1Q6GPH4 301 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 TCTEX1D1Q8N7M0 179 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 ZNF439Q8NDP4 499 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 OR1L1Q8NH94 360 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 ZFAND1Q8TCF1 268 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 CYGBQ8WWM9 190 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 FLYWCH2Q96CP2 140 aaKnown RBP2.84□□□□□ -1.95
LINC00393-202ENST00000452852 C18orf15Q96N68 181 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 OR4C12Q96R67 309 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 HSPB9Q9BQS6 159 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 GGTLC1Q9BX51 225 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 SLC25A39Q9BZJ4 359 aaPredicted RBP2.84□□□□□ -1.95
LINC00393-202ENST00000452852 IFI27L2Q9H2X8 130 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 BANF2Q9H503 90 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 C8orf4Q9NR00 106 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 BABAM2Q9NXR7 383 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 WSB1Q9Y6I7 421 aa2.84□□□□□ -1.95
LINC00393-202ENST00000452852 TRBV6-6A0A0A6YYG2 114 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 EFCAB10A6NFE3 127 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 OR5H14A6NHG9 310 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF705GA8MUZ8 300 aaPredicted RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 G3V318 75 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 SLC22A1O15245 554 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 YPEL1O60688 119 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 SLC22A5O76082 557 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 APOA2P02652 100 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 LGALS1P09382 135 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 SAA2P0DJI9 122 aaPredicted RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 HLA-GP17693 338 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 CELP19835 753 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 BLVRBP30043 206 aaPredicted RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 PPP1CCP36873 323 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 OR10A3P58181 314 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 TPPP2P59282 170 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 MRPS15P82914 257 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 RUNX1Q01196 453 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 TRAM1Q15629 374 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 BSXQ3C1V8 233 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 ACTBL2Q562R1 376 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 MPV17L2Q567V2 206 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 TTC32Q5I0X7 151 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 RBM48Q5RL73 367 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 GLT8D1Q68CQ7 371 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF660Q6AZW8 331 aaPredicted RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 FAM131AQ6UXB0 335 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF833PQ6ZTB9 187 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 GAPTQ8N292 157 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 C15orf56Q8N910 161 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 MUC7Q8TAX7 377 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 MRPL30Q8TCC3 161 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 RNASEH2CQ8TDP1 164 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 C15orf40Q8WUR7 153 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 FAM104AQ969W3 186 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF414Q96IQ9 312 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 KCNS1Q96KK3 526 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 DERL3Q96Q80 235 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 YPEL2Q96QA6 119 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 NABP2Q9BQ15 211 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 C7orf50Q9BRJ6 194 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 MRPL20Q9BYC9 149 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 SRRQ9GZT4 340 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 VCXQ9H320 206 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 ZNF355PQ9NSJ1 428 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 PLEKHJ1Q9NW61 149 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 METTL1Q9UBP6 276 aaKnown RBP2.83□□□□□ -1.96
LINC00393-202ENST00000452852 ANXA10Q9UJ72 324 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 WASHC3Q9Y3C0 194 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 RYR3Q15413 4870 aa2.83□□□□□ -1.96
LINC00393-202ENST00000452852 DNAH7Q8WXX0 4024 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 I3L521 148 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 ADAP1O75689 374 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 RBBP9O75884 186 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 NDUFA3O95167 84 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 CNIH1O95406 144 aa2.82□□□□□ -1.96
LINC00393-202ENST00000452852 TRGV3P03979 118 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms