RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 B3GALT5-AS1P59052 145 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 MGST2Q99735 147 aa11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 PNRC2Q9NPJ4 139 aaKnown RBP11.43□□□□□ -0.58
RAPGEF3-205ENST00000449771 MS4A6AQ9H2W1 248 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 JPT2Q9H910 190 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 MSMBP08118 114 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 FOXL1Q12952 345 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 IGKV1D-17A0A075B6S4 117 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 CDK2AP2O75956 126 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 MPV17L2Q567V2 206 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 SIGLEC9Q9Y336 463 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 H0YIZ8 118 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 NCR2O95944 276 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 SCN5AQ14524 2016 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 TMEM155Q4W5P6 130 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 LINC00477Q96M19 166 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 RHPN1-AS1Q9BWJ2 59 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 GNB1LQ9BYB4 327 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 MDC1Q14676 2089 aaKnown RBP11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 ADCYAP1P18509 176 aa11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 POLR3KQ9Y2Y1 108 aaPredicted RBP11.42□□□□□ -0.58
RAPGEF3-205ENST00000449771 SYNJ2BPP57105 145 aa11.41□□□□□ -0.58
RAPGEF3-205ENST00000449771 CHCHD1Q96BP2 118 aaKnown RBP11.41□□□□□ -0.58
RAPGEF3-205ENST00000449771 LCTP09848 1927 aa11.41□□□□□ -0.58
RAPGEF3-205ENST00000449771 THADAQ6YHU6 1953 aa11.41□□□□□ -0.58
RAPGEF3-205ENST00000449771 SH2D1AO60880 128 aa11.41□□□□□ -0.58
RAPGEF3-205ENST00000449771 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
RAPGEF3-205ENST00000449771 SLC25A2Q9BXI2 301 aa11.41□□□□□ -0.58
RAPGEF3-205ENST00000449771 LCN12Q6JVE5 192 aa11.41□□□□□ -0.58
RAPGEF3-205ENST00000449771 PRTN3P24158 256 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 Q6P435 159 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 ADAMTSL5Q6ZMM2 481 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 Q8TAT8 98 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 C5orf63A6NC05 138 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 APC2O95996 2303 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 TOMM40O96008 361 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 TCRAP04437 139 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 DEFB130BP0DP73 79 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 DEFB130AP0DP74 79 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 KLHDC3Q9BQ90 382 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 LSM4Q9Y4Z0 139 aaKnown RBP11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 HEATR5BQ9P2D3 2071 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 GGTLC3B5MD39 225 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 ERCC8Q13216 396 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 TEX43Q6ZNM6 134 aa11.4□□□□□ -0.58
RAPGEF3-205ENST00000449771 IFI27L1Q96BM0 104 aa11.4□□□□□ -0.59
RAPGEF3-205ENST00000449771 D6R8Y8 96 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 PRR31Q5SQ13 230 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 TMEM256Q8N2U0 113 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 CITED2Q99967 270 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 A0A087X0K7 114 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 M0R2P5 195 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 TMEM190Q8WZ59 177 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 GATA3P23771 443 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 CDKN1BP46527 198 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 GATD1Q8NB37 220 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 LINC01549A6NIU2 74 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 LINC00473A8K010 186 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 J3QKU1 62 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 OVOL3O00110 214 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 PAX4O43316 350 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 C5orf24Q7Z6I8 188 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 CD5LO43866 347 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 PSG3Q16557 428 aa11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 Q71RC1 249 aaPredicted RBP11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 DAZ1Q9NQZ3 744 aaKnown RBP11.39□□□□□ -0.59
RAPGEF3-205ENST00000449771 ASXL3Q9C0F0 2248 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 A0A1B0GW64 132 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 SPANXA1Q9NS26 97 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 RASL10AQ92737 203 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 LINC01619G3V211 115 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 IGKV1-5P01602 117 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 EDA2RQ9HAV5 297 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 GREB1Q4ZG55 1949 aa11.38□□□□□ -0.59
RAPGEF3-205ENST00000449771 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
RAPGEF3-205ENST00000449771 DEFB131AP59861 70 aa11.37□□□□□ -0.59
RAPGEF3-205ENST00000449771 SUPT4H1P63272 117 aaKnown RBP11.37□□□□□ -0.59
RAPGEF3-205ENST00000449771 C1orf159Q96HA4 380 aa11.37□□□□□ -0.59
RAPGEF3-205ENST00000449771 KIR3DS1Q14943 382 aa11.37□□□□□ -0.59
RAPGEF3-205ENST00000449771 LINC00205P59089 165 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 TSSC4Q9Y5U2 329 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 SPTBP11277 2137 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 C14orf178Q8N769 122 aaPredicted RBP11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 CSTL1Q9H114 145 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 hDV102S1A0JD36 115 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 VCYO14598 125 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 GATA4P43694 442 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 C6orf226Q5I0X4 101 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 C20orf144Q9BQM9 153 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 TMEM238C9JI98 176 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 HGFACQ04756 655 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 RP1P56715 2156 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 A0A087WWL8 130 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 UBE2E1P51965 193 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 SS18Q15532 418 aa11.36□□□□□ -0.59
RAPGEF3-205ENST00000449771 F8WEM9 126 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms