RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	TRAV8-1	A0A0A6YYK1	113 aa		13.37	□□□□□ -0.27
TOM1-210	ENST00000449058	FAM231B	A6NCW3	169 aa		13.37	□□□□□ -0.27
TOM1-210	ENST00000449058	KLRD1	Q13241	179 aa		13.37	□□□□□ -0.27
TOM1-210	ENST00000449058	CBY1	Q9Y3M2	126 aa		13.37	□□□□□ -0.27
TOM1-210	ENST00000449058	LRBA	P50851	2863 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	ARHGAP32	A7KAX9	2087 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	IGLC2	P0DOY2	106 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	NTF3	P20783	257 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	PRTN3	P24158	256 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	C16orf54	Q6UWD8	224 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	GOLT1A	Q6ZVE7	132 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	ZNF491	Q8N8L2	437 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	OR2D3	Q8NGH3	330 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	DAZAP1	Q96EP5	407 aa	Known RBP	13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	RNF24	Q9Y225	148 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	LOC105371242	A0A075B767	164 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	KLRB1	Q12918	225 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	FBLN7	Q53RD9	439 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	BPIFA4P	Q86YQ2	179 aa		13.36	□□□□□ -0.27
TOM1-210	ENST00000449058	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058		M0QZK8	103 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	UCN	P55089	124 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	C5orf64	Q2M2E5	130 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	CIART	Q8N365	385 aa	Predicted RBP	13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	IGFBPL1	Q8WX77	278 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	BORCS7	Q96B45	105 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	RNF125	Q96EQ8	232 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	PGLYRP4	Q96LB8	373 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	TACC2	O95359	2948 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	MRPS12	O15235	138 aa	Known RBP	13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	HSBP1	O75506	76 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	CD24	P25063	80 aa		13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	NEU4	Q8WWR8	484 aa	Predicted RBP	13.35	□□□□□ -0.27
TOM1-210	ENST00000449058	ABCA4	P78363	2273 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	TPR	P12270	2363 aa	Known RBP	13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	ZNF785	A8K8V0	405 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	PCP4	P48539	62 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	SIGLEC15	Q6ZMC9	328 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	PRNT	Q86SH4	94 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	LYPD1	Q8N2G4	141 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	OR4F17	Q8NGA8	305 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	C17orf77	Q96MU5	243 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058		Q71RC1	249 aa	Predicted RBP	13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	TMEM75	Q8N9X5	138 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	URB1-AS1	Q96HZ7	61 aa		13.34	□□□□□ -0.27
TOM1-210	ENST00000449058	IGLV11-55	A0A075B6I3	123 aa		13.33	□□□□□ -0.28
TOM1-210	ENST00000449058	NPIPB5	A8MRT5	1133 aa		13.33	□□□□□ -0.28
TOM1-210	ENST00000449058	OVOL3	O00110	214 aa		13.33	□□□□□ -0.28
TOM1-210	ENST00000449058	COL8A1	P27658	744 aa		13.33	□□□□□ -0.28
TOM1-210	ENST00000449058	KLF17	Q5JT82	389 aa	Predicted RBP	13.33	□□□□□ -0.28
TOM1-210	ENST00000449058	ZNF48	Q96MX3	618 aa	Predicted RBP	13.33	□□□□□ -0.28
TOM1-210	ENST00000449058	FANCD2OS	Q96PS1	177 aa		13.33	□□□□□ -0.28
TOM1-210	ENST00000449058	RAX	Q9Y2V3	346 aa		13.33	□□□□□ -0.28
TOM1-210	ENST00000449058	TRAV30	A0A087WSZ9	112 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	FAM181B	A6NEQ2	426 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	TCAP	O15273	167 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	TOX4	O94842	621 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	HLA-DRB1	P01911	266 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	IL4	P05112	153 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	SPATA45	Q537H7	98 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	RNASEK	Q6P5S7	137 aa	Known RBP	13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	C1orf122	Q6ZSJ8	110 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058		M0R2Z0	102 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	APOH	P02749	345 aa	Predicted RBP	13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	FOXA3	P55318	350 aa	Predicted RBP	13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	HES1	Q14469	280 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	ZNF562	Q6V9R5	426 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	ZNF414	Q96IQ9	312 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	ZFP30	Q9Y2G7	519 aa		13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.32	□□□□□ -0.28
TOM1-210	ENST00000449058	FAM162B	Q5T6X4	162 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058	EBLN2	Q6P2I7	272 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058		Q8N6K4	173 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058		A0A1W2PRD5	423 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058		A0A1W2PRF3	423 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058		A0A1W2PRM7	423 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058	HAX1	O00165	279 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058	PRR31	Q5SQ13	230 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058	DYNAP	Q8N1N2	210 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058	ZC2HC1A	Q96GY0	325 aa		13.31	□□□□□ -0.28
TOM1-210	ENST00000449058		F8W735	103 aa	Predicted RBP	13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	GNG7	O60262	68 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	MFAP4	P55083	255 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	TTC9C	Q8N5M4	171 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	KIR3DL3	Q8N743	410 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	ARPC1A	Q92747	370 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058		S4R3C0	116 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	C2orf70	A6NJV1	201 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	OOSP1	A8MZH6	123 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	FCGR2B	P31994	310 aa	Predicted RBP	13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	NDP	Q00604	133 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	PSG3	Q16557	428 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	CCDC144NL	Q6NUI1	221 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	VMO1	Q7Z5L0	202 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	PSG8	Q9UQ74	426 aa		13.3	□□□□□ -0.28
TOM1-210	ENST00000449058	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.29	□□□□□ -0.28
TOM1-210	ENST00000449058		K7EQM0	130 aa		13.29	□□□□□ -0.28
TOM1-210	ENST00000449058	IGLC3	P0DOY3	106 aa		13.29	□□□□□ -0.28
TOM1-210	ENST00000449058	EBI3	Q14213	229 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms