RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 AZU1P20160 251 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 AADACP22760 399 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 NFYAP23511 347 aaPredicted RBP3.26□□□□□ -1.89
SDCBP-205ENST00000447267 CLDN12P56749 244 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 OR10A3P58181 314 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 S100A10P60903 97 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 RHOGP84095 191 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 FABP5Q01469 135 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 PAX5Q02548 391 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 ST3GAL3Q11203 375 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 ATXN7L3Q14CW9 347 aaPredicted RBP3.26□□□□□ -1.89
SDCBP-205ENST00000447267 BATFQ16520 125 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 IQCJQ1A5X6 159 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 MORN2Q502X0 79 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 ZNF684Q5T5D7 378 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 PRSS54Q6PEW0 395 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 TMEM182Q6ZP80 229 aaPredicted RBP3.26□□□□□ -1.89
SDCBP-205ENST00000447267 SLC25A48Q6ZT89 311 aaKnown RBP3.26□□□□□ -1.89
SDCBP-205ENST00000447267 SLC35G3Q8N808 338 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 SAMD12Q8N8I0 201 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 C8orf31Q8N9H6 132 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 OR4K13Q8NH42 304 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 CIRBP-AS1Q8TBR5 109 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 MARCH1Q8TCQ1 289 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 TNFAIP8L1Q8WVP5 186 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 CANT1Q8WVQ1 401 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 GPR146Q96CH1 333 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BLQ99880 126 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 C20orf144Q9BQM9 153 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 MIEN1Q9BRT3 115 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 DHDHQ9UQ10 334 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 C14orf166Q9Y224 244 aaKnown RBP3.26□□□□□ -1.89
SDCBP-205ENST00000447267 UFC1Q9Y3C8 167 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 CSDC2Q9Y534 153 aaKnown RBP3.26□□□□□ -1.89
SDCBP-205ENST00000447267 USH2AO75445 5202 aa3.26□□□□□ -1.89
SDCBP-205ENST00000447267 A0A0D9SG52 128 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 DHRS7CA6NNS2 312 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 HMSDA8MTL9 139 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 PRAC2D3DTV9 90 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 ZNF593O00488 134 aaPredicted RBP3.25□□□□□ -1.89
SDCBP-205ENST00000447267 SDHDO14521 159 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 RBFOX2O43251 390 aaKnown RBP eCLIP3.25□□□□□ -1.89
SDCBP-205ENST00000447267 PRH1P02810 166 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 GIPP09681 153 aaPredicted RBP3.25□□□□□ -1.89
SDCBP-205ENST00000447267 C8orf88P0DMB2 117 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 APELAP0DMC3 54 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 GABRB1P18505 474 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 INPP1P49441 399 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 LINC01547P58512 204 aaPredicted RBP3.25□□□□□ -1.89
SDCBP-205ENST00000447267 SEC61GP60059 68 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 KRTAP10-8P60410 259 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 UBE2KP61086 200 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 GNMTQ14749 295 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 PLGLAQ15195 96 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 HMGN3Q15651 99 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 TNXAQ16473 311 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 TIMM50Q3ZCQ8 353 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 TMEM41BQ5BJD5 291 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 PDZD11Q5EBL8 140 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 FAM222AQ5U5X8 452 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 DGAT2L7PQ6IED9 249 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 OR10K2Q6IF99 312 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 EPGNQ6UW88 154 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 MBOAT2Q6ZWT7 520 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 ZFP41Q8N8Y5 198 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 ZNF439Q8NDP4 499 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 OR1S2Q8NGQ3 325 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 OR52E5Q8NH55 327 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 ARL11Q969Q4 196 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 USMG5Q96IX5 58 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 LINC01600Q96MT4 127 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 SIGMAR1Q99720 223 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 NIPSNAP3BQ9BS92 247 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 OR51E2Q9H255 320 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 RPS10P5Q9NQ39 176 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.25□□□□□ -1.89
SDCBP-205ENST00000447267 DCAF13Q9NV06 445 aaKnown RBP3.25□□□□□ -1.89
SDCBP-205ENST00000447267 UQCC1Q9NVA1 299 aa3.25□□□□□ -1.89
SDCBP-205ENST00000447267 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 FFAR1O14842 300 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 RAB29O14966 203 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BKO60814 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 CDS2O95674 445 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 CA2P00918 260 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 IGHV3-23P01764 117 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 RLN1P04808 185 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BJP06899 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 ESDP10768 282 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 PGAM2P15259 253 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 BCL3P20749 454 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 PPIBP23284 216 aaKnown RBP3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BOP23527 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 F2RP25116 425 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 IL3RAP26951 378 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BBP33778 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 RPS10P46783 165 aaKnown RBP3.24□□□□□ -1.89
SDCBP-205ENST00000447267 POLR2JP52435 117 aaKnown RBP3.24□□□□□ -1.89
SDCBP-205ENST00000447267 HIST1H2BDP58876 126 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 TAS2R43P59537 309 aa3.24□□□□□ -1.89
SDCBP-205ENST00000447267 PLP1P60201 277 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms