RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 LEPROTL1O95214 131 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 HIST1H1EP10412 219 aaKnown RBP11.33□□□□□ -0.6
MCF2L-218ENST00000442625 DLX1P56177 255 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 IGFL2Q6UWQ7 119 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 FAM231DQ6ZW35 169 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 MRPL32Q9BYC8 188 aaKnown RBP11.33□□□□□ -0.6
MCF2L-218ENST00000442625 EPDR1Q9UM22 224 aa11.33□□□□□ -0.6
MCF2L-218ENST00000442625 IGHV3-72A0A0B4J1Y9 119 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 MBD3L4A6NDZ8 208 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-218ENST00000442625 MBD3L3A6NE82 208 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-218ENST00000442625 MBD3L5A6NJ08 208 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-218ENST00000442625 K7EQM0 130 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 FAM87AP0C7U9 286 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 GATA4P43694 442 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 HBBP68871 147 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 ERHP84090 104 aaKnown RBP11.32□□□□□ -0.6
MCF2L-218ENST00000442625 PDPNQ86YL7 162 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 DEFB124Q8NES8 71 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 MBD3L2Q8NHZ7 208 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-218ENST00000442625 CNOT1A5YKK6 2376 aaKnown RBP11.32□□□□□ -0.6
MCF2L-218ENST00000442625 SVEP1Q4LDE5 3571 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 KLK10O43240 276 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 SMIM20Q8N5G0 67 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 FAM169BQ8N8A8 192 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 C19orf24Q9BVV8 132 aa11.32□□□□□ -0.6
MCF2L-218ENST00000442625 RPL32P62910 135 aaKnown RBP11.31□□□□□ -0.6
MCF2L-218ENST00000442625 BVES-AS1Q5T3Y7 98 aa11.31□□□□□ -0.6
MCF2L-218ENST00000442625 CIARTQ8N365 385 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-218ENST00000442625 ZNF714Q96N38 554 aa11.31□□□□□ -0.6
MCF2L-218ENST00000442625 SIGMAR1Q99720 223 aa11.31□□□□□ -0.6
MCF2L-218ENST00000442625 ZNF835Q9Y2P0 537 aa11.31□□□□□ -0.6
MCF2L-218ENST00000442625 hADV38S2A0JD32 116 aa11.31□□□□□ -0.6
MCF2L-218ENST00000442625 FCN3O75636 299 aa11.31□□□□□ -0.6
MCF2L-218ENST00000442625 APOA2P02652 100 aa11.31□□□□□ -0.6
MCF2L-218ENST00000442625 TEX45Q8NA69 505 aa11.31□□□□□ -0.6
MCF2L-218ENST00000442625 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
MCF2L-218ENST00000442625 TCRBV4S1A1TA0A5B7 111 aa11.3□□□□□ -0.6
MCF2L-218ENST00000442625 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
MCF2L-218ENST00000442625 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
MCF2L-218ENST00000442625 H1FXQ92522 213 aaKnown RBP11.3□□□□□ -0.6
MCF2L-218ENST00000442625 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
MCF2L-218ENST00000442625 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
MCF2L-218ENST00000442625 P01737 135 aa11.3□□□□□ -0.6
MCF2L-218ENST00000442625 OR10X1Q8NGY0 326 aa11.3□□□□□ -0.6
MCF2L-218ENST00000442625 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
MCF2L-218ENST00000442625 MYCNOSP40205 109 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 LRRC10Q5BKY1 277 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 OSR1Q8TAX0 266 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-218ENST00000442625 NAA38Q9BRA0 125 aaKnown RBP11.29□□□□□ -0.6
MCF2L-218ENST00000442625 PSG8Q9UQ74 426 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 GAGE12BA1L429 117 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 MRAP2Q96G30 205 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 GPR82Q96P67 336 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 LINC00574Q9H8X3 128 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 LINC00312Q9Y6C7 94 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 CACNA1HO95180 2353 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 TM4SF5O14894 197 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 WIPF1O43516 503 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 FXYD7P58549 80 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
MCF2L-218ENST00000442625 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-218ENST00000442625 TRAV8-6A0A0B4J262 113 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 NCR2O95944 276 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 FTH1P19P0C7X4 201 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 CD40P25942 277 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 TMEM200BQ69YZ2 307 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 OR1L4Q8NGR5 311 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 ONECUT1Q9UBC0 465 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 CHEK1O14757 476 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
MCF2L-218ENST00000442625 UQCRFS1P47985 274 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
MCF2L-218ENST00000442625 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 PLP1P60201 277 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 PSG9Q00887 426 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 FAM106AQ4KMX7 169 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 ST20Q9HBF5 79 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 A8MWL6 223 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 CNTFRP26992 372 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 LYPD2Q6UXB3 125 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 ZADH2Q8N4Q0 377 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 TMEM116Q8NCL8 245 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 CCL17Q92583 94 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 Q9H3A6 140 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 SCRT2Q9NQ03 307 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 UFC1Q9Y3C8 167 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 LRBAP50851 2863 aa11.27□□□□□ -0.61
MCF2L-218ENST00000442625 K7EM74 188 aa11.26□□□□□ -0.61
MCF2L-218ENST00000442625 CRXO43186 299 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-218ENST00000442625 TEX36Q5VZQ5 186 aa11.26□□□□□ -0.61
MCF2L-218ENST00000442625 ATP5L2Q7Z4Y8 100 aa11.26□□□□□ -0.61
MCF2L-218ENST00000442625 OR4C13Q8NGP0 309 aa11.26□□□□□ -0.61
MCF2L-218ENST00000442625 PRSS22Q9GZN4 317 aa11.26□□□□□ -0.61
MCF2L-218ENST00000442625 DEFB125Q8N687 156 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms