RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 LINC00173Q6ZV60 143 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 C2orf91Q6ZV80 131 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 LRRC75A-AS1Q8N1F1 130 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 PIGCQ92535 297 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 RND1Q92730 232 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 PDFQ9HBH1 243 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 AP5S1Q9NUS5 200 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 MPC1Q9Y5U8 109 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 FBN2P35556 2912 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 ADAMTS20P59510 1910 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 DENND4CQ5VZ89 1909 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 TMEM213A2RRL7 107 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 IZUMO1RA6ND01 250 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 IGLL5B9A064 214 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 SYNGR3O43761 229 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 C1orf105O95561 183 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 PPYP01298 95 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 IGFBP3P17936 291 aaPredicted RBP2.28□□□□□ -2.04
LIG4-203ENST00000442234 GATA4P43694 442 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 CACNG7P62955 275 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 RPL18Q07020 188 aaKnown RBP2.28□□□□□ -2.04
LIG4-203ENST00000442234 DPTQ07507 201 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 MALLQ13021 153 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 DIAPH2-AS1Q14236 149 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 DEFB121Q5J5C9 76 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 C22orf34Q6ZV56 151 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 PPP1R32Q7Z5V6 425 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 OR4C3Q8NH37 302 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 ATP6V0E2Q8NHE4 81 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 GTSF1Q8WW33 167 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 PSMG3-AS1Q96PY0 264 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 CHAC1Q9BUX1 264 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 EPDR1Q9UM22 224 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 SIGLEC9Q9Y336 463 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 APCP25054 2843 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 C2orf16Q68DN1 1984 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 IGKV1D-8A0A087WSZ0 117 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 A0A096LPE4 126 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 TRAV8-4A0A0B4J246 113 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 IGHV1-24A0A0C4DH33 117 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 A0A1W2PPZ6 126 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 MBD3L4A6NDZ8 208 aaPredicted RBP2.28□□□□□ -2.04
LIG4-203ENST00000442234 MBD3L3A6NE82 208 aaPredicted RBP2.28□□□□□ -2.04
LIG4-203ENST00000442234 MBD3L5A6NJ08 208 aaPredicted RBP2.28□□□□□ -2.04
LIG4-203ENST00000442234 ACTL6BO94805 426 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 IGKV1D-33P01593 117 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 IGKV1-33P01594 117 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 ARL14EPLP0DKL9 152 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 BCL3P20749 454 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 CFPP27918 469 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 HERVK_113P63121 156 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 ID3Q02535 119 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 OR1C1Q15619 314 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 TMEM155Q4W5P6 130 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 TEX45Q8NA69 505 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 C15orf53Q8NAA6 179 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 LRRC29Q8WV35 223 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 OVCA2Q8WZ82 227 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 CHCHD1Q96BP2 118 aaKnown RBP2.28□□□□□ -2.04
LIG4-203ENST00000442234 ZNF414Q96IQ9 312 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 PBOV1Q9GZY1 135 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 COA3Q9Y2R0 106 aaPredicted RBP2.28□□□□□ -2.04
LIG4-203ENST00000442234 IGLV3-10A0A075B6K4 115 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 A0A0A6YYD4 124 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TRAV2A0A0B4J234 112 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TRAV17A0A0B4J275 112 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 GGTLC3B5MD39 225 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 K7EMI3 77 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TNFRSF13BO14836 293 aaPredicted RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 SPRY1O43609 319 aaPredicted RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 TIMM8AO60220 97 aaPredicted RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 IGLC6P0CF74 106 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 RPL35AP18077 110 aaKnown RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 NPPCP23582 126 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 ERVK11-1P61568 191 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 RPL30P62888 115 aaKnown RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 TEN1Q86WV5 123 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 ZDHHC23Q8IYP9 409 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 SHISA5Q8N114 240 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 GAPTQ8N292 157 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 GATD1Q8NB37 220 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 KIR2DL5BQ8NHK3 375 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 C16orf52Q8NHV5 167 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 NT5CQ8TCD5 201 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 CFHR4Q92496 578 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 PLPPR2Q96GM1 343 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 ZNF355PQ9NSJ1 428 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TIMM9Q9Y5J7 89 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 PCDH15Q96QU1 1955 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 MXRA5Q9NR99 2828 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 TRAV4A0A0B4J268 109 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 A0A1W2PPI3 338 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 H3BML4 177 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 PDCD6O75340 191 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 NKX2-2O95096 273 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 BGLAPP02818 100 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 THBDP07204 575 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 ZNF883P0CG24 379 aa2.27□□□□□ -2.05
LIG4-203ENST00000442234 ZFP36P26651 326 aaKnown RBP2.27□□□□□ -2.05
LIG4-203ENST00000442234 RPL13AP40429 203 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms