RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SPANXB1Q9NS25 103 aaPredicted RBP13.49□□□□□ -0.25
PMS1-213ENST00000441310 TMEM14BQ9NUH8 114 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 PGPA6NDG6 321 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 C15orf65H3BRN8 121 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 GPR82Q96P67 336 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
PMS1-213ENST00000441310 EPDR1Q9UM22 224 aa13.49□□□□□ -0.25
PMS1-213ENST00000441310 FOXA2Q9Y261 457 aaPredicted RBP13.49□□□□□ -0.25
PMS1-213ENST00000441310 CEACAM4O75871 244 aa13.48□□□□□ -0.25
PMS1-213ENST00000441310 ZNF474Q6S9Z5 364 aaPredicted RBP13.48□□□□□ -0.25
PMS1-213ENST00000441310 C11orf53Q8IXP5 236 aa13.48□□□□□ -0.25
PMS1-213ENST00000441310 BCL6BQ8N143 479 aaPredicted RBP13.48□□□□□ -0.25
PMS1-213ENST00000441310 COL25A1Q9BXS0 654 aaPredicted RBP13.48□□□□□ -0.25
PMS1-213ENST00000441310 FAM215AQ9Y5M1 114 aa13.48□□□□□ -0.25
PMS1-213ENST00000441310 C10orf113Q5VZT2 155 aa13.48□□□□□ -0.25
PMS1-213ENST00000441310 RBMXL3Q8N7X1 1067 aaKnown RBP13.48□□□□□ -0.25
PMS1-213ENST00000441310 SOX21Q9Y651 276 aaPredicted RBP13.48□□□□□ -0.25
PMS1-213ENST00000441310 RELNP78509 3460 aa13.48□□□□□ -0.25
PMS1-213ENST00000441310 COL6A6A6NMZ7 2263 aa13.48□□□□□ -0.25
PMS1-213ENST00000441310 ARFGEF3Q5TH69 2177 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 ABCA4P78363 2273 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 SPRNQ5BIV9 151 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 FAM222BQ8WU58 562 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 ITLN1Q8WWA0 313 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 TTTY13Q9BZ97 58 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 C22orf34Q6ZV56 151 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 IFI27P40305 119 aaPredicted RBP13.47□□□□□ -0.25
PMS1-213ENST00000441310 ASCL5Q7RTU5 278 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 MRAP2Q96G30 205 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 PRSS22Q9GZN4 317 aa13.47□□□□□ -0.25
PMS1-213ENST00000441310 CHD8Q9HCK8 2581 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 KBTBD11-OT1A0A1B0GTJ5 212 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 INSL3P51460 131 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 FAM27E3Q08E93 113 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 FOXC1Q12948 553 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 PDPNQ86YL7 162 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 WFDC3Q8IUB2 231 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 FXYD5Q96DB9 178 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 IFI27L2Q9H2X8 130 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 NCOR2Q9Y618 2525 aa13.46□□□□□ -0.25
PMS1-213ENST00000441310 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.46□□□□□ -0.26
PMS1-213ENST00000441310 PRB4P10163 310 aaPredicted RBP13.46□□□□□ -0.26
PMS1-213ENST00000441310 COL8A1P27658 744 aa13.46□□□□□ -0.26
PMS1-213ENST00000441310 TPPP3Q9BW30 176 aa13.46□□□□□ -0.26
PMS1-213ENST00000441310 NHP2Q9NX24 153 aaKnown RBP13.46□□□□□ -0.26
PMS1-213ENST00000441310 IGHV3OR15-7A0A075B7D8 119 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 FAM201AQ5SY85 155 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 DPF1Q92782 380 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 H3BMG7 143 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 KALRNO60229 2985 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 PATE2Q6UY27 113 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 Q6ZS92 163 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 CXXC4Q9H2H0 198 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 TCTEX1D4Q5JR98 221 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 AMTNQ6UX39 209 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 FOXI2Q6ZQN5 318 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 Q71RC1 249 aaPredicted RBP13.45□□□□□ -0.26
PMS1-213ENST00000441310 MLST8Q9BVC4 326 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 SLC25A15Q9Y619 301 aa13.45□□□□□ -0.26
PMS1-213ENST00000441310 A0A096LNJ9 63 aa13.44□□□□□ -0.26
PMS1-213ENST00000441310 SIVA1O15304 175 aa13.44□□□□□ -0.26
PMS1-213ENST00000441310 SPRY3O43610 288 aa13.44□□□□□ -0.26
PMS1-213ENST00000441310 ARMS2P0C7Q2 107 aa13.44□□□□□ -0.26
PMS1-213ENST00000441310 TRAV8-1A0A0A6YYK1 113 aa13.44□□□□□ -0.26
PMS1-213ENST00000441310 C19orf71A6NCJ1 209 aa13.44□□□□□ -0.26
PMS1-213ENST00000441310 CD69Q07108 199 aa13.44□□□□□ -0.26
PMS1-213ENST00000441310 CIARTQ8N365 385 aaPredicted RBP13.44□□□□□ -0.26
PMS1-213ENST00000441310 MBD3L4A6NDZ8 208 aaPredicted RBP13.43□□□□□ -0.26
PMS1-213ENST00000441310 MBD3L3A6NE82 208 aaPredicted RBP13.43□□□□□ -0.26
PMS1-213ENST00000441310 MBD3L5A6NJ08 208 aaPredicted RBP13.43□□□□□ -0.26
PMS1-213ENST00000441310 LTAP01374 205 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 IGF2-ASQ6U949 168 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 MBD3L2Q8NHZ7 208 aaPredicted RBP13.43□□□□□ -0.26
PMS1-213ENST00000441310 DDB2Q92466 427 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 C1orf162Q8NEQ5 155 aaPredicted RBP13.43□□□□□ -0.26
PMS1-213ENST00000441310 FLYWCH2Q96CP2 140 aaKnown RBP13.43□□□□□ -0.26
PMS1-213ENST00000441310 ZNF414Q96IQ9 312 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 ZZEF1O43149 2961 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 SRRM4A7MD48 611 aaKnown RBP13.43□□□□□ -0.26
PMS1-213ENST00000441310 PRCDQ00LT1 54 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 CR1LQ2VPA4 569 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 LGALS9BQ3B8N2 356 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 CT83Q5H943 113 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 LGALS9CQ6DKI2 356 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 LINC00305Q7Z4B0 112 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 FAM90A1Q86YD7 464 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 CD177Q8N6Q3 437 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 ASCL2Q99929 193 aa13.43□□□□□ -0.26
PMS1-213ENST00000441310 A0A1W2PRD5 423 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 A0A1W2PRF3 423 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 A0A1W2PRM7 423 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 SLC25A17O43808 307 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 IGLV1-44P01699 117 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 CFHR2P36980 270 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 KIR2DS2P43631 304 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 CFAP161Q6P656 301 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 JPT1Q9UK76 154 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 HAX1O00165 279 aa13.42□□□□□ -0.26
PMS1-213ENST00000441310 RNASE2P10153 161 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms