RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 KTN1-AS1Q86SY8 53 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 DEFB125Q8N687 156 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 OR51I2Q9H344 312 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 PAQR5Q9NXK6 330 aaPredicted RBP1.2□□□□□ -2.22
VPS41-207ENST00000439468 TIMM22Q9Y584 194 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 PLIN4Q96Q06 1357 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 MED12Q93074 2177 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 PLCE1Q9P212 2302 aa1.2□□□□□ -2.22
VPS41-207ENST00000439468 TGIF2-C20orf24A0A0A6YYL0 155 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 TRAV38-1A0A0B4J264 116 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 TRAPPC2LH3BP13 241 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 LEPROTO15243 131 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 C1QCP02747 245 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 RAB13P51153 203 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 AP1S1P61966 158 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 EMX1Q04741 257 aaPredicted RBP1.19□□□□□ -2.22
VPS41-207ENST00000439468 FABP9Q0Z7S8 132 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 EIF3IQ13347 325 aaKnown RBP1.19□□□□□ -2.22
VPS41-207ENST00000439468 LYZL1Q6UWQ5 148 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 COA5Q86WW8 74 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 C10orf67Q8IYJ2 551 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 OR8B12Q8NGG6 310 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 PTH2Q96A98 100 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 TMA16Q96EY4 203 aaKnown RBP1.19□□□□□ -2.22
VPS41-207ENST00000439468 RMND5BQ96G75 393 aaPredicted RBP1.19□□□□□ -2.22
VPS41-207ENST00000439468 SPZ1Q9BXG8 430 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 OR8D2Q9GZM6 311 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 FKBP14Q9NWM8 211 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 NOSIPQ9Y314 301 aaKnown RBP1.19□□□□□ -2.22
VPS41-207ENST00000439468 TIMM9Q9Y5J7 89 aa1.19□□□□□ -2.22
VPS41-207ENST00000439468 CCDC88CQ9P219 2028 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 PLECQ15149 4684 aaKnown RBP1.18□□□□□ -2.22
VPS41-207ENST00000439468 CADP27708 2225 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 IGHV3-64A0A075B6Q5 118 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 TRAV7A0A075B6U4 112 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 IGHV1-18A0A0C4DH31 117 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 A0A0D9SEW6 157 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 IGHV1-69-2A0A0G2JMI3 117 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 A0A0J9YW62 118 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 ARL5CA6NH57 179 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 HMSDA8MTL9 139 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 DISC1C4P0D8 188 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 H7C2G1 150 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 CREBL2O60519 120 aaPredicted RBP1.18□□□□□ -2.22
VPS41-207ENST00000439468 ZNF737O75373 536 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 CALB1P05937 261 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 FAM228BP0C875 321 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 PRB4P10163 310 aaPredicted RBP1.18□□□□□ -2.22
VPS41-207ENST00000439468 HLA-DMBP28068 263 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 ALDH3A1P30838 453 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 S100A7P31151 101 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 GLO1Q04760 184 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 C8orf74Q6P047 294 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 TBC1D19Q8N5T2 526 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 RNF133Q8WVZ7 376 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 ACOT12Q8WYK0 555 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 ERMAPQ96PL5 475 aaPredicted RBP1.18□□□□□ -2.22
VPS41-207ENST00000439468 MRPL40Q9NQ50 206 aaKnown RBP1.18□□□□□ -2.22
VPS41-207ENST00000439468 CMTM6Q9NX76 183 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 DYNC1H1Q14204 4646 aaKnown RBP1.18□□□□□ -2.22
VPS41-207ENST00000439468 TCHHQ07283 1943 aa1.18□□□□□ -2.22
VPS41-207ENST00000439468 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
VPS41-207ENST00000439468 WNK2Q9Y3S1 2297 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 GGT3PA6NGU5 568 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 KCNK1O00180 336 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 ACOX3O15254 700 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 CIAO1O76071 339 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 NAPSAO96009 420 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 IFNA5P01569 189 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 TNNC2P02585 160 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 APODP05090 189 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 ISG15P05161 165 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 GPX1P07203 203 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 CCL4P13236 92 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 MYL12AP19105 171 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 CSN1S1P47710 185 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 MARCKSL1P49006 195 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 OR4D2P58180 307 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 ACSM3Q53FZ2 586 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 FAM201AQ5SY85 155 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 FAM27BQ5VT28 67 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 ALKAL1Q6UXT8 129 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 C3orf56Q8N813 242 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 FDCSPQ8NFU4 85 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 ZNF563Q8TA94 476 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 HSPB9Q9BQS6 159 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 MRPL32Q9BYC8 188 aaKnown RBP1.17□□□□□ -2.22
VPS41-207ENST00000439468 GUCA1BQ9UMX6 200 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 FUT9Q9Y231 359 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 ANGPT4Q9Y264 503 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 V9GYY5 206 aaPredicted RBP1.17□□□□□ -2.22
VPS41-207ENST00000439468 MYH11P35749 1972 aa1.17□□□□□ -2.22
VPS41-207ENST00000439468 PKD1P98161 4303 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 TRGV2A0A075B6R0 118 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.16□□□□□ -2.22
VPS41-207ENST00000439468 NIPSNAP2O75323 286 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 UCHL3P15374 230 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 GPX2P18283 190 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 PSMB8P28062 276 aa1.16□□□□□ -2.22
VPS41-207ENST00000439468 HAAOP46952 286 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms