RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 COMMD9Q9P000 198 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 ABRACLQ9P1F3 81 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 VAX2Q9UIW0 290 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 RAB22AQ9UL26 194 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM14AQ9Y6G1 99 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 V9GYH0 126 aa1.27□□□□□ -2.21
HMGB1P18-201ENST00000438801 TRAV36DV7A0A075B6V5 113 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMED7-TICAM2A0A0A6YYA0 188 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGLV1-36A0A0B4J1U3 117 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGKV1D-13A0A0B4J2D9 117 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGHV1-69DA0A0B4J2H0 117 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 DAPL1A0PJW8 107 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 NAP1L6A6NFF2 107 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR4C45A6NMZ5 311 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 COLCA2A8K830 154 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 C17orf51A8MQB3 221 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 J3QRK9 145 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 M0R129 80 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 AIPO00170 330 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 PDCD5O14737 125 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 PLA2G10O15496 165 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 SS18L1O75177 396 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 RP2O75695 350 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 LYZL6O75951 148 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 UBL3O95164 117 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 CDRT1O95170 752 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 MOSP00540 346 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGHV1-69P01742 117 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 TYMSP04818 313 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 MMP7P09237 267 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGKV1-13P0DP09 117 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 IL7P13232 177 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 SPI1P17947 270 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 CXCR1P25024 350 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 PAX6P26367 422 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 CRABP1P29762 137 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC6A1P30531 599 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 TSPOP30536 169 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 PYCR1P32322 319 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 EIF1P41567 113 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 GALR1P47211 349 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 POLR2HP52434 150 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 CLDN12P56749 244 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 RAB4BP61018 213 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 LSM3P62310 102 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 RAP1AP62834 184 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 RPS25P62851 125 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 HIST1H3AP68431 136 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 MRPS10P82664 201 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 H3F3AP84243 136 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 SSBP1Q04837 148 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 ERCC8Q13216 396 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR2F1Q13607 317 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 EBPQ15125 230 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 C4orf26Q17RF5 130 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 HLA-DRB5Q30154 266 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF791Q3KP31 576 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 CLEC12AQ5QGZ9 265 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 CCNJQ5T5M9 372 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM162BQ5T6X4 162 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 LAMTOR1Q6IAA8 161 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 CNIH2Q6PI25 160 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM131AQ6UXB0 335 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM231DQ6ZW35 169 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 HIST2H3AQ71DI3 136 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 SSX8Q7RTT4 187 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OLIG3Q7RTU3 272 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC36A1Q7Z2H8 476 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 LRRC28Q86X40 367 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZFP82Q8N141 532 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR6V1Q8N148 313 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 CYB561D1Q8N8Q1 229 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 PXT1Q8NFP0 134 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC26A10Q8NG04 563 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR10J6PQ8NGY7 276 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR5J2Q8NH18 312 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR4S2Q8NH73 311 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 PFN4Q8NHR9 129 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OTOSQ8NHW6 89 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 ASB17Q8WXJ9 295 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 PTX4Q96A99 478 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 LINC00477Q96M19 166 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 Q96M85 177 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 ERMAPQ96PL5 475 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 HDHD3Q9BSH5 251 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 TBL1XR1Q9BZK7 514 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR8D2Q9GZM6 311 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 C6orf62Q9GZU0 229 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 ABCG5Q9H222 651 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 MIXL1Q9H2W2 232 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 MAP1LC3AQ9H492 121 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 RPP21Q9H633 154 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 RNF122Q9H9V4 155 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 EXOSC4Q9NPD3 245 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 RBFOX1Q9NWB1 397 aaKnown RBP1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 COPZ2Q9P299 210 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 ANXA10Q9UJ72 324 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 HDGFL3Q9Y3E1 203 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 IER3IP1Q9Y5U9 82 aa1.26□□□□□ -2.21
HMGB1P18-201ENST00000438801 TRAV27A0A087WT01 109 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms