RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 TBX15Q96SF7 602 aa9.96□□□□□ -0.81
HCG18-236ENST00000438412 ATG101Q9BSB4 218 aa9.96□□□□□ -0.81
HCG18-236ENST00000438412 GNB1LQ9BYB4 327 aa9.96□□□□□ -0.81
HCG18-236ENST00000438412 PRORYQ9H606 182 aa9.96□□□□□ -0.81
HCG18-236ENST00000438412 MRPL27Q9P0M9 148 aaKnown RBP9.96□□□□□ -0.81
HCG18-236ENST00000438412 IGLV2-11P01706 119 aa9.96□□□□□ -0.82
HCG18-236ENST00000438412 AMY1AP04745 511 aa9.96□□□□□ -0.82
HCG18-236ENST00000438412 RNF224P0DH78 156 aa9.96□□□□□ -0.82
HCG18-236ENST00000438412 EGR2P11161 476 aaPredicted RBP9.96□□□□□ -0.82
HCG18-236ENST00000438412 TMEM11P17152 192 aa9.96□□□□□ -0.82
HCG18-236ENST00000438412 CEACAM3P40198 252 aa9.96□□□□□ -0.82
HCG18-236ENST00000438412 RNF125Q96EQ8 232 aa9.96□□□□□ -0.82
HCG18-236ENST00000438412 SIRPDQ9H106 197 aa9.96□□□□□ -0.82
HCG18-236ENST00000438412 POLR3KQ9Y2Y1 108 aaPredicted RBP9.96□□□□□ -0.82
HCG18-236ENST00000438412 GNG7O60262 68 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 SAA4P35542 130 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 PLP1P60201 277 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 PKIAP61925 76 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 DEFA6Q01524 100 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 PAX2Q02962 417 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 ECSCRQ19T08 205 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 Q56UQ5 140 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 PIP4P2Q8N4L2 257 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 OR2D3Q8NGH3 330 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 NOL4LQ96MY1 436 aaPredicted RBP9.95□□□□□ -0.82
HCG18-236ENST00000438412 MLST8Q9BVC4 326 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 LINC00527Q9UJ94 153 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 IGLV11-55A0A075B6I3 123 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 IGHV7-81A0A0B4J1V7 117 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 IZUMO1RA6ND01 250 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 TMEM219Q86XT9 240 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 C5orf17Q8NAS9 161 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 GPR82Q96P67 336 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 CHRDL1Q9BU40 450 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 SAMD10Q9BYL1 202 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 FBXL7Q9UJT9 491 aa9.95□□□□□ -0.82
HCG18-236ENST00000438412 IGHV3OR16-13A0A075B7E8 117 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 IGHV3-74A0A0B4J1X5 117 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 ZNF705FA8MVS1 300 aaPredicted RBP9.94□□□□□ -0.82
HCG18-236ENST00000438412 G3V318 75 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 ZNF253O75346 499 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 ZNF705DP0CH99 300 aaPredicted RBP9.94□□□□□ -0.82
HCG18-236ENST00000438412 ZNF705BP0CI00 300 aaPredicted RBP9.94□□□□□ -0.82
HCG18-236ENST00000438412 TLN2Q9Y4G6 2542 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 TRAV9-1A0A075B6T8 112 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 IGHV3-66A0A0C4DH42 116 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 TSTD3H0UI37 97 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 LTAP01374 205 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 APCSP02743 223 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 PAX1P15863 534 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 HLA-DMBP28068 263 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 FOXA3P55318 350 aaPredicted RBP9.94□□□□□ -0.82
HCG18-236ENST00000438412 LMO4P61968 165 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 TOMM20LQ6UXN7 152 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 Q86TA4 180 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 Q8N6K4 173 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 STXBP6Q8NFX7 210 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 RNF5Q99942 180 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 SHANK2-AS3Q9BTD1 123 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 NAGKQ9UJ70 344 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 DOPEY2Q9Y3R5 2298 aa9.94□□□□□ -0.82
HCG18-236ENST00000438412 H3BRN7 92 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 HLA-DRB1P01911 266 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 IGLC2P0DOY2 106 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 ZNF562Q6V9R5 426 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 BRD3OSQ6XYD6 125 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 Q8N9W7 124 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 VN1R17PQ8TDU5 208 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 GRAMD2BQ96HH9 432 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 ZNF331Q9NQX6 463 aaPredicted RBP9.93□□□□□ -0.82
HCG18-236ENST00000438412 TRBV19A0A075B6N1 114 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 IGHV2-70DA0A0C4DH43 119 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 A0A1W2PS18 150 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 A8MWP6 167 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 TOMM40O96008 361 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 IGHV4-39P01824 125 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 HIST1H1EP10412 219 aaKnown RBP9.93□□□□□ -0.82
HCG18-236ENST00000438412 SIGLEC15Q6ZMC9 328 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 NRGNQ92686 78 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 ZC2HC1AQ96GY0 325 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 TMUB1Q9BVT8 246 aa9.93□□□□□ -0.82
HCG18-236ENST00000438412 TBL2Q9Y4P3 447 aaKnown RBP9.93□□□□□ -0.82
HCG18-236ENST00000438412 NTF3P20783 257 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 EFNA4P52798 201 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 KRTDAPP60985 99 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 PMCHL1Q16048 86 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 TSKUQ8WUA8 353 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 C8orf49Q96NF6 230 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 IGHV3-49A0A0A0MS15 119 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 MUC21A0A0G2JKD1 596 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 MUC21A0A140T8X8 626 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 MRPS12O15235 138 aaKnown RBP9.92□□□□□ -0.82
HCG18-236ENST00000438412 ATP6V0E1O15342 81 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 AMTP48728 403 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 MUC21Q5SSG8 566 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 C18orf32Q8TCD1 76 aa9.92□□□□□ -0.82
HCG18-236ENST00000438412 RPP21Q9H633 154 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms