RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 P01737 135 aa14.66□□□□□ -0.06
CLK1-205ENST00000434813 ZNF843Q8N446 348 aa14.66□□□□□ -0.06
CLK1-205ENST00000434813 ZNF491Q8N8L2 437 aa14.66□□□□□ -0.06
CLK1-205ENST00000434813 IGFBPL1Q8WX77 278 aa14.66□□□□□ -0.06
CLK1-205ENST00000434813 RNF125Q96EQ8 232 aa14.66□□□□□ -0.06
CLK1-205ENST00000434813 ZNF48Q96MX3 618 aaPredicted RBP14.66□□□□□ -0.06
CLK1-205ENST00000434813 RNF114Q9Y508 228 aa14.66□□□□□ -0.06
CLK1-205ENST00000434813 SOX21Q9Y651 276 aaPredicted RBP14.66□□□□□ -0.06
CLK1-205ENST00000434813 IGLV11-55A0A075B6I3 123 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 TRBV19A0A075B6N1 114 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 IGLV2-11P01706 119 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 IGLC2P0DOY2 106 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 KLF5Q13887 457 aaPredicted RBP14.65□□□□□ -0.06
CLK1-205ENST00000434813 VMO1Q7Z5L0 202 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 OR4F17Q8NGA8 305 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 ARPC1AQ92747 370 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 GFRA4Q9GZZ7 299 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 NRN1Q9NPD7 142 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 CFAP46Q8IYW2 2715 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 HRNRQ86YZ3 2850 aaPredicted RBP14.65□□□□□ -0.06
CLK1-205ENST00000434813 NPIPB6E9PJ23 425 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 PMCHP20382 165 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 ZNF562Q6V9R5 426 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 TCF24Q7RTU0 167 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 EXOC3-AS1Q8N2X6 119 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 Q8N6K4 173 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 C20orf144Q9BQM9 153 aa14.65□□□□□ -0.06
CLK1-205ENST00000434813 DCHS2Q6V1P9 2916 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 TRAV30A0A087WSZ9 112 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 A0A1W2PRD5 423 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 A0A1W2PRF3 423 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 A0A1W2PRM7 423 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 WI2-2373I1.2A0A1W2PRP0 233 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 IL4P05112 153 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 HBBP68871 147 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 MINOS1Q5TGZ0 78 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 FANCD2OSQ96PS1 177 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 MINOS1-NBL1R4GNA1 71 aa14.64□□□□□ -0.07
CLK1-205ENST00000434813 A6NNC1 897 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 MRPS12O15235 138 aaKnown RBP14.63□□□□□ -0.07
CLK1-205ENST00000434813 SIGLEC15Q6ZMC9 328 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 GOLT1AQ6ZVE7 132 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 LYPD1Q8N2G4 141 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 VN1R17PQ8TDU5 208 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 GTSF1Q8WW33 167 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 DAZAP1Q96EP5 407 aaKnown RBP14.63□□□□□ -0.07
CLK1-205ENST00000434813 ARHGAP32A7KAX9 2087 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 SPTBN1Q01082 2364 aaKnown RBP14.63□□□□□ -0.07
CLK1-205ENST00000434813 TRAV8-1A0A0A6YYK1 113 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 FAM231BA6NCW3 169 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 HLA-DRB1P01911 266 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 CAMPP49913 170 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 NDPQ00604 133 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 EBI3Q14213 229 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 KLF17Q5JT82 389 aaPredicted RBP14.63□□□□□ -0.07
CLK1-205ENST00000434813 DYNAPQ8N1N2 210 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 Q8N976 141 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 TMEM75Q8N9X5 138 aa14.63□□□□□ -0.07
CLK1-205ENST00000434813 ALKBH7Q9BT30 221 aaPredicted RBP14.63□□□□□ -0.07
CLK1-205ENST00000434813 A0A1B0GV90 55 aa14.62□□□□□ -0.07
CLK1-205ENST00000434813 A0A1W2PPR1 153 aa14.62□□□□□ -0.07
CLK1-205ENST00000434813 GNG7O60262 68 aa14.62□□□□□ -0.07
CLK1-205ENST00000434813 KRTDAPP60985 99 aa14.62□□□□□ -0.07
CLK1-205ENST00000434813 S100A7AQ86SG5 101 aa14.62□□□□□ -0.07
CLK1-205ENST00000434813 TTC9CQ8N5M4 171 aa14.62□□□□□ -0.07
CLK1-205ENST00000434813 OR4B1Q8NGF8 309 aa14.62□□□□□ -0.07
CLK1-205ENST00000434813 SSBP4Q9BWG4 385 aaPredicted RBP14.62□□□□□ -0.07
CLK1-205ENST00000434813 ZFP36P26651 326 aaKnown RBP14.61□□□□□ -0.07
CLK1-205ENST00000434813 C16orf54Q6UWD8 224 aa14.61□□□□□ -0.07
CLK1-205ENST00000434813 RBPMS2Q6ZRY4 209 aaKnown RBP14.61□□□□□ -0.07
CLK1-205ENST00000434813 NIT1Q86X76 327 aa14.61□□□□□ -0.07
CLK1-205ENST00000434813 VAMP8Q9BV40 100 aa14.61□□□□□ -0.07
CLK1-205ENST00000434813 C19orf84I3L1E1 186 aa14.61□□□□□ -0.07
CLK1-205ENST00000434813 MFAP4P55083 255 aa14.61□□□□□ -0.07
CLK1-205ENST00000434813 TDRG1Q3Y452 100 aa14.61□□□□□ -0.07
CLK1-205ENST00000434813 PRNTQ86SH4 94 aa14.61□□□□□ -0.07
CLK1-205ENST00000434813 CIARTQ8N365 385 aaPredicted RBP14.61□□□□□ -0.07
CLK1-205ENST00000434813 UBTD1Q9HAC8 227 aa14.61□□□□□ -0.07
CLK1-205ENST00000434813 DIRC3C9JPN6 131 aa14.6□□□□□ -0.07
CLK1-205ENST00000434813 F8W735 103 aaPredicted RBP14.6□□□□□ -0.07
CLK1-205ENST00000434813 EREGO14944 169 aa14.6□□□□□ -0.07
CLK1-205ENST00000434813 TOX4O94842 621 aa14.6□□□□□ -0.07
CLK1-205ENST00000434813 OR2D3Q8NGH3 330 aa14.6□□□□□ -0.07
CLK1-205ENST00000434813 C17orf77Q96MU5 243 aa14.6□□□□□ -0.07
CLK1-205ENST00000434813 SIRPDQ9H106 197 aa14.6□□□□□ -0.07
CLK1-205ENST00000434813 ABCA1O95477 2261 aa14.6□□□□□ -0.07
CLK1-205ENST00000434813 NCBP2LA6PVI3 153 aaKnown RBP14.59□□□□□ -0.07
CLK1-205ENST00000434813 COL8A1P27658 744 aa14.59□□□□□ -0.07
CLK1-205ENST00000434813 ZNF414Q96IQ9 312 aa14.59□□□□□ -0.07
CLK1-205ENST00000434813 PGLYRP4Q96LB8 373 aa14.59□□□□□ -0.07
CLK1-205ENST00000434813 C21orf62Q9NYP8 219 aa14.59□□□□□ -0.07
CLK1-205ENST00000434813 ZFP30Q9Y2G7 519 aa14.59□□□□□ -0.07
CLK1-205ENST00000434813 S4R3C0 116 aa14.59□□□□□ -0.07
CLK1-205ENST00000434813 K7EQM0 130 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 TMEM11P17152 192 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 FCGR2BP31994 310 aaPredicted RBP14.58□□□□□ -0.08
CLK1-205ENST00000434813 PDE6HQ13956 83 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 FAM19A2Q8N3H0 131 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 THYN1Q9P016 225 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 PAM16Q9Y3D7 125 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms