RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LRRN3E7EW58 273 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 TRAPPC2LH3BP13 241 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 GSTZ1O43708 216 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 FADS1O60427 444 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 NDUFB2O95178 105 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 AHSA1O95433 338 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 APOMO95445 188 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 REG1AP05451 166 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 CRHBPP24387 322 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 RPL12P30050 165 aaKnown RBP1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 INSL3P51460 131 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 BLVRAP53004 296 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 TAS2R45P59539 299 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 STX5Q13190 355 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 SS18Q15532 418 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 KCNJ8Q15842 424 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 PLPPR5Q32ZL2 321 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 C1orf194Q5T5A4 169 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 C3orf33Q6P1S2 294 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 ZNF767PQ75MW2 155 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 NAA40Q86UY6 237 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 LRRC28Q86X40 367 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR52R1Q8NGF1 315 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR4C16Q8NGL9 310 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 PTH2Q96A98 100 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 KIFC1Q9BW19 673 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 BABAM2Q9NXR7 383 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 TAAR3PQ9P1P4 343 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 ASB4Q9Y574 426 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 NINQ8N4C6 2090 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 HEATR5AQ86XA9 2040 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 hCG_1818297A0A087WSY0 165 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 A0A1W2PQD3 144 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 TCRBV4S1A1TA0A5B7 111 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 NDUFA2O43678 99 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 IGHV1-69P01742 117 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 CLPSP04118 112 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 CD36P16671 472 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 CCL1P22362 96 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 LPAR6P43657 344 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 RBM11P57052 281 aaKnown RBP1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 RWDD2BP57060 319 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 HOXC5Q00444 222 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 NNATQ16517 81 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 ARHGAP11BQ3KRB8 267 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 SLC48A1Q6P1K1 146 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 SFXN4Q6P4A7 337 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 ZNF322Q6U7Q0 402 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 AAED1Q7RTV5 226 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 GPHB5Q86YW7 130 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 SBSPONQ8IVN8 264 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 C10orf67Q8IYJ2 551 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 LRRC34Q8IZ02 419 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 Q8NDZ9 215 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR4X2Q8NGF9 303 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR8B3Q8NGG8 313 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR10A6Q8NH74 314 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 ZNF675Q8TD23 568 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 C16orf78Q8WTQ4 265 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 SERPINI1Q99574 410 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 MND1Q9BWT6 205 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 TUBA4BQ9H853 241 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 TMEM106BQ9NUM4 274 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 SNX12Q9UMY4 172 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 MINOS1-NBL1R4GNA1 71 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 KIAA1549Q9HCM3 1950 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 HYDINQ4G0P3 5121 aa1.33□□□□□ -2.2
HMGB1P27-201ENST00000431429 IGLV3-9A0A075B6K5 115 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 A0A087WUU8 490 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 A0A0J9YX75 114 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 MDFIC2A0A1B0GVS7 189 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 GRIFINA4D1Z8 144 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 NUPR2A6NF83 97 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR11H12B2RN74 326 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 C9JCJ5 164 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 H3BPC8 53 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 TGOLN2O43493 480 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 UBL3O95164 117 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 ISG15P05161 165 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 GZMBP10144 247 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 CD79AP11912 226 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 CD24P25063 80 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 REG1BP48304 166 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 H3F3AP84243 136 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 TNFAIP6P98066 277 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 UAP1Q16222 522 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 IMPG1Q17R60 797 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 ZNF181Q2M3W8 571 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 OGFRL1Q5TC84 451 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 AMTNQ6UX39 209 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 C2orf91Q6ZV80 131 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 SPATA12Q7Z6I5 190 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 UBL4BQ8N7F7 174 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 MNS1Q8NEH6 495 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR8J2Q8NGG1 315 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR5C1Q8NGR4 320 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR11H2Q8NH07 326 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 CCDC42Q96M95 316 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR52B2Q96RD2 323 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms