RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 PET100P0DJ07 73 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 ID1P41134 155 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 EWSR1Q01844 656 aaKnown RBP eCLIP11.18□□□□□ -0.62
PTCD1-204ENST00000430982 NHLH2Q02577 135 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 ATP6V1FQ16864 119 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 VWC2Q2TAL6 325 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 LINC00052Q96N35 136 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 OVOL2Q9BRP0 275 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 SHANK2-AS3Q9BTD1 123 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 RSG1Q9BU20 258 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 MED28Q9H204 178 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 WDR83OSQ9Y284 106 aa11.18□□□□□ -0.62
PTCD1-204ENST00000430982 SPRY2O43597 315 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 MPC2O95563 127 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 FGF7P21781 194 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 PXDC1Q5TGL8 231 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 MIC13Q5XKP0 118 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 Q6ZWC4 215 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 GPR82Q96P67 336 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 ARV1Q9H2C2 271 aa11.17□□□□□ -0.62
PTCD1-204ENST00000430982 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
PTCD1-204ENST00000430982 DNAH10Q8IVF4 4471 aa11.16□□□□□ -0.62
PTCD1-204ENST00000430982 KIAA1109Q2LD37 5005 aa11.16□□□□□ -0.62
PTCD1-204ENST00000430982 CA1P00915 261 aaPredicted RBP11.16□□□□□ -0.62
PTCD1-204ENST00000430982 CLINT1Q14677 625 aa11.16□□□□□ -0.62
PTCD1-204ENST00000430982 FCN2Q15485 313 aa11.16□□□□□ -0.62
PTCD1-204ENST00000430982 OR5C1Q8NGR4 320 aa11.16□□□□□ -0.62
PTCD1-204ENST00000430982 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
PTCD1-204ENST00000430982 RNF126Q9BV68 326 aa11.16□□□□□ -0.62
PTCD1-204ENST00000430982 KMT2AQ03164 3969 aa11.16□□□□□ -0.62
PTCD1-204ENST00000430982 HECTD4Q9Y4D8 3996 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 SOCS3O14543 225 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 RPL7P18124 248 aaKnown RBP11.15□□□□□ -0.62
PTCD1-204ENST00000430982 ATF4P18848 351 aaPredicted RBP11.15□□□□□ -0.62
PTCD1-204ENST00000430982 CXCL3P19876 107 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 PSMB3P49720 205 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 MEOX2P50222 304 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 FGL1Q08830 312 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 Q6ZRG5 221 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 TRPT1Q86TN4 253 aaKnown RBP11.15□□□□□ -0.62
PTCD1-204ENST00000430982 MBD2Q9UBB5 411 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 TP53TG1Q9Y2A0 90 aa11.15□□□□□ -0.62
PTCD1-204ENST00000430982 ISLRO14498 428 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 B2MP61769 119 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 OPCMLQ14982 345 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 LINC00305Q7Z4B0 112 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 THAP6Q8TBB0 222 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 RNF183Q96D59 192 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 SLC39A9Q9NUM3 307 aa11.14□□□□□ -0.63
PTCD1-204ENST00000430982 ELOA3CA0A087WX78 387 aaPredicted RBP11.13□□□□□ -0.63
PTCD1-204ENST00000430982 RPL29P47914 159 aaKnown RBP11.13□□□□□ -0.63
PTCD1-204ENST00000430982 DEFB1P60022 68 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 PRR20EP86478 221 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 PRR20CP86479 221 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 PRR20DP86480 221 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 PRR20BP86481 221 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 PRR20AP86496 221 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 OR11H7Q8NGC8 314 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 OR1L4Q8NGR5 311 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 IL17DQ8TAD2 202 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 TMEM37Q8WXS4 190 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 C17orf77Q96MU5 243 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 DNAJC4Q9NNZ3 241 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 RNF24Q9Y225 148 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 HSPB11Q9Y547 144 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 PXMP4Q9Y6I8 212 aa11.13□□□□□ -0.63
PTCD1-204ENST00000430982 MPDU1O75352 247 aa11.12□□□□□ -0.63
PTCD1-204ENST00000430982 SPP1P10451 314 aa11.12□□□□□ -0.63
PTCD1-204ENST00000430982 RPL12P30050 165 aaKnown RBP11.12□□□□□ -0.63
PTCD1-204ENST00000430982 MORN3Q6PF18 240 aaPredicted RBP11.12□□□□□ -0.63
PTCD1-204ENST00000430982 LINC00476Q8WZB0 136 aa11.12□□□□□ -0.63
PTCD1-204ENST00000430982 C20orf173Q96LM9 149 aa11.12□□□□□ -0.63
PTCD1-204ENST00000430982 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
PTCD1-204ENST00000430982 SMIM3Q9BZL3 60 aa11.12□□□□□ -0.63
PTCD1-204ENST00000430982 H3BMM0 161 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 IGKV3-20P01619 116 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 HLA-DRB4P13762 266 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 C4BPBP20851 252 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 OXA1LQ15070 435 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 GDF5OSQ5U4N7 250 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 IGFL4Q6B9Z1 124 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 FOXI2Q6ZQN5 318 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 ZNF709Q8N972 641 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 LRRC20Q8TCA0 184 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 GATAD1Q8WUU5 269 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 CHAC2Q8WUX2 184 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 PFDN5Q99471 154 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 ATP5SQ99766 215 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 HLA-DRB4X5D2U9 266 aa11.11□□□□□ -0.63
PTCD1-204ENST00000430982 A0A087X0K7 114 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms