RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 GTF2H5Q6ZYL4 71 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
RPL28-202ENST00000426763 TMEM183AQ8IXX5 376 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 FCN3O75636 299 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 Q8NA96 180 aa11.17□□□□□ -0.62
RPL28-202ENST00000426763 G3V318 75 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 NDUFB8O95169 186 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 SPATA45Q537H7 98 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 CTSZQ9UBR2 303 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 Q8NFD4 153 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 DPH3Q96FX2 82 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 ZNF414Q96IQ9 312 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 PPIFP30405 207 aaKnown RBP11.16□□□□□ -0.62
RPL28-202ENST00000426763 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 YLPM1P49750 1951 aaKnown RBP11.16□□□□□ -0.62
RPL28-202ENST00000426763 C8orf31Q8N9H6 132 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
RPL28-202ENST00000426763 YPEL3P61236 119 aaPredicted RBP11.15□□□□□ -0.62
RPL28-202ENST00000426763 LCN12Q6JVE5 192 aa11.15□□□□□ -0.62
RPL28-202ENST00000426763 TSKUQ8WUA8 353 aa11.15□□□□□ -0.62
RPL28-202ENST00000426763 PGPEP1LA6NFU8 196 aa11.15□□□□□ -0.62
RPL28-202ENST00000426763 PRSS2P07478 247 aa11.15□□□□□ -0.62
RPL28-202ENST00000426763 CDX1P47902 265 aaPredicted RBP11.15□□□□□ -0.62
RPL28-202ENST00000426763 ZNF134P52741 427 aa11.15□□□□□ -0.62
RPL28-202ENST00000426763 C18orf15Q96N68 181 aa11.15□□□□□ -0.62
RPL28-202ENST00000426763 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
RPL28-202ENST00000426763 RPL35AP18077 110 aaKnown RBP11.15□□□□□ -0.62
RPL28-202ENST00000426763 SRSF3P84103 164 aaKnown RBP11.15□□□□□ -0.62
RPL28-202ENST00000426763 TCF21O43680 179 aa11.15□□□□□ -0.63
RPL28-202ENST00000426763 HOXB4P17483 251 aaPredicted RBP11.15□□□□□ -0.63
RPL28-202ENST00000426763 H3BVH4 76 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 LHBP01229 141 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 PPBPP02775 128 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 RNF151Q2KHN1 245 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 TMEM170BQ5T4T1 132 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 RFNGQ9Y644 331 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 FBXL19-AS1Q494R0 122 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 PET117Q6UWS5 81 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 IL17RELQ6ZVW7 336 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 RCHY1Q96PM5 261 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 IGHV4-61A0A0C4DH41 118 aa11.14□□□□□ -0.63
RPL28-202ENST00000426763 HOXA3O43365 443 aaPredicted RBP11.14□□□□□ -0.63
RPL28-202ENST00000426763 INSP01308 110 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 A0A1B0GW64 132 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 NUDT10Q8NFP7 164 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 NUDT11Q96G61 164 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 NRN1Q9NPD7 142 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 TMEM160Q9NX00 188 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 CADP27708 2225 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 H3BRM9 83 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 PRB4P10163 310 aaPredicted RBP11.13□□□□□ -0.63
RPL28-202ENST00000426763 PDE6HQ13956 83 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 PSG3Q16557 428 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 LIME1Q9H400 295 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 WNK2Q9Y3S1 2297 aa11.13□□□□□ -0.63
RPL28-202ENST00000426763 IGHV4-30-2A0A087WSY4 118 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 DIAPH2-AS1Q14236 149 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 OR11H1Q8NG94 326 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 OR11H2Q8NH07 326 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 SLC25A34Q6PIV7 304 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 FAM120AOSQ5T036 256 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 HIST1H4GQ99525 98 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.12□□□□□ -0.63
RPL28-202ENST00000426763 COX6CP09669 75 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 DEFB112Q30KQ8 113 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 SPRNQ5BIV9 151 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
RPL28-202ENST00000426763 SSBP4Q9BWG4 385 aaPredicted RBP11.12□□□□□ -0.63
RPL28-202ENST00000426763 ERASQ7Z444 233 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 IGKV1-39P01597 117 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 IGKV1D-39P04432 117 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 ELANEP08246 267 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 Q6ZSR3 168 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 C10orf105Q8TEF2 133 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 TPSG1Q9NRR2 321 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 VPREB3Q9UKI3 123 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 ZNF106Q9H2Y7 1883 aaKnown RBP11.11□□□□□ -0.63
RPL28-202ENST00000426763 PRADC1Q9BSG0 188 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 KIAA1549LQ6ZVL6 1849 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 IFI27P40305 119 aaPredicted RBP11.11□□□□□ -0.63
RPL28-202ENST00000426763 DEFB131AP59861 70 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 IGFL4Q6B9Z1 124 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 OR11H6Q8NGC7 330 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 FOXC2Q99958 501 aa11.11□□□□□ -0.63
RPL28-202ENST00000426763 FXYD7P58549 80 aa11.1□□□□□ -0.63
RPL28-202ENST00000426763 TMEM249Q2WGJ8 235 aa11.1□□□□□ -0.63
RPL28-202ENST00000426763 Q8TAT8 98 aa11.1□□□□□ -0.63
RPL28-202ENST00000426763 VPS25Q9BRG1 176 aa11.1□□□□□ -0.63
RPL28-202ENST00000426763 NXT2Q9NPJ8 142 aaKnown RBP11.1□□□□□ -0.63
RPL28-202ENST00000426763 UQCR10Q9UDW1 63 aa11.1□□□□□ -0.63
RPL28-202ENST00000426763 LBHQ53QV2 105 aaPredicted RBP11.1□□□□□ -0.63
RPL28-202ENST00000426763 FGF23Q9GZV9 251 aaPredicted RBP11.1□□□□□ -0.63
RPL28-202ENST00000426763 NDUFA4O00483 81 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms