RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 YTHDF2Q9Y5A9 579 aaKnown RBP11.62□□□□□ -0.55
GINS3-203ENST00000426538 NF1P21359 2839 aa11.62□□□□□ -0.55
GINS3-203ENST00000426538 A0A1W2PRE2 83 aa11.61□□□□□ -0.55
GINS3-203ENST00000426538 CYSRT1A8MQ03 144 aa11.61□□□□□ -0.55
GINS3-203ENST00000426538 HAX1O00165 279 aa11.61□□□□□ -0.55
GINS3-203ENST00000426538 ZNF207O43670 478 aaKnown RBP11.61□□□□□ -0.55
GINS3-203ENST00000426538 NDUFS6O75380 124 aaKnown RBP11.61□□□□□ -0.55
GINS3-203ENST00000426538 APOC3P02656 99 aa11.61□□□□□ -0.55
GINS3-203ENST00000426538 SNRPCP09234 159 aaKnown RBP11.61□□□□□ -0.55
GINS3-203ENST00000426538 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
GINS3-203ENST00000426538 RPL7P18124 248 aaKnown RBP11.61□□□□□ -0.55
GINS3-203ENST00000426538 ATP5G3P48201 142 aa11.61□□□□□ -0.55
GINS3-203ENST00000426538 CYB561D1Q8N8Q1 229 aa11.61□□□□□ -0.55
GINS3-203ENST00000426538 NSD1Q96L73 2696 aaPredicted RBP11.61□□□□□ -0.55
GINS3-203ENST00000426538 CLPSL1A2RUU4 121 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 TMEM250H0YL14 139 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 CRYBB3P26998 211 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 GPHB5Q86YW7 130 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 RNF114Q9Y508 228 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 F6UZH7 168 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 BUB3O43684 328 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 ADCYAP1P18509 176 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 RANP62826 216 aaKnown RBP11.6□□□□□ -0.55
GINS3-203ENST00000426538 SUMO1P63165 101 aaKnown RBP11.6□□□□□ -0.55
GINS3-203ENST00000426538 TCTEX1D4Q5JR98 221 aa11.6□□□□□ -0.55
GINS3-203ENST00000426538 F8P00451 2351 aa11.59□□□□□ -0.55
GINS3-203ENST00000426538 FN1P02751 2386 aaKnown RBP11.59□□□□□ -0.55
GINS3-203ENST00000426538 C10orf91Q5T1B1 145 aa11.59□□□□□ -0.55
GINS3-203ENST00000426538 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
GINS3-203ENST00000426538 WIPF2Q8TF74 440 aaPredicted RBP11.59□□□□□ -0.55
GINS3-203ENST00000426538 WFDC12Q8WWY7 111 aa11.59□□□□□ -0.55
GINS3-203ENST00000426538 TMEM190Q8WZ59 177 aa11.59□□□□□ -0.55
GINS3-203ENST00000426538 GPR82Q96P67 336 aa11.59□□□□□ -0.55
GINS3-203ENST00000426538 A0A1W2PS18 150 aa11.58□□□□□ -0.56
GINS3-203ENST00000426538 H3BQ15 152 aa11.58□□□□□ -0.56
GINS3-203ENST00000426538 C4orf3Q8WVX3 66 aa11.58□□□□□ -0.56
GINS3-203ENST00000426538 DPF1Q92782 380 aa11.58□□□□□ -0.56
GINS3-203ENST00000426538 ZNF586Q9NXT0 402 aa11.58□□□□□ -0.56
GINS3-203ENST00000426538 CARHSP1Q9Y2V2 147 aaKnown RBP11.58□□□□□ -0.56
GINS3-203ENST00000426538 IGHV4OR15-8A0A075B7B6 117 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 IGHV3OR16-13A0A075B7E8 117 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 A0A087WW49 117 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 IGHV3-49A0A0A0MS15 119 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 IGHV3-74A0A0B4J1X5 117 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 IGHV3-66A0A0C4DH42 116 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 H3BTX0 84 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 APOHP02749 345 aaPredicted RBP11.57□□□□□ -0.56
GINS3-203ENST00000426538 ATF4P18848 351 aaPredicted RBP11.57□□□□□ -0.56
GINS3-203ENST00000426538 SVBPQ8N300 66 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 C11orf44Q8N8P7 122 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 KLHL30-AS1Q8NEE0 82 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 DAZ1Q9NQZ3 744 aaKnown RBP11.57□□□□□ -0.56
GINS3-203ENST00000426538 UFC1Q9Y3C8 167 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 U3KQE9 123 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 K7EMT4 169 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 MRPS12O15235 138 aaKnown RBP11.57□□□□□ -0.56
GINS3-203ENST00000426538 IGLC2P0DOY2 106 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 GALR1P47211 349 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 SRSF2Q01130 221 aaKnown RBP11.57□□□□□ -0.56
GINS3-203ENST00000426538 C18orf65Q6ZTR6 163 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 CCDC28AQ8IWP9 274 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 OR11H1Q8NG94 326 aa11.57□□□□□ -0.56
GINS3-203ENST00000426538 RPUSD4Q96CM3 377 aaKnown RBP11.57□□□□□ -0.56
GINS3-203ENST00000426538 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 PGPA6NDG6 321 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 ZNF785A8K8V0 405 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 ZNF727A8MUV8 499 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 GGTLC3B5MD39 225 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 LINC01619G3V211 115 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 NDUFB4O95168 129 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 CD28P10747 220 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 HOXD3P31249 432 aaPredicted RBP11.56□□□□□ -0.56
GINS3-203ENST00000426538 ZNF674Q2M3X9 581 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 TM4SF20Q53R12 229 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 FAM90A2PQ658T7 463 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 NIPSNAP3BQ9BS92 247 aa11.56□□□□□ -0.56
GINS3-203ENST00000426538 TSSC4Q9Y5U2 329 aaPredicted RBP11.56□□□□□ -0.56
GINS3-203ENST00000426538 SCO2A0A1W2PP80 73 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 PDE6HQ13956 83 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 DEFB136Q30KP8 78 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 FAM74A3Q4VXF1 159 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 LYPD1Q8N2G4 141 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 OR1N2Q8NGR9 330 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 C17orf77Q96MU5 243 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 SMIM7Q9BQ49 75 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 PARLQ9H300 379 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 Q9H3A6 140 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 A0A1B0GUS0 222 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 SNAPINO95295 136 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 SLC25A5P05141 298 aaKnown RBP11.55□□□□□ -0.56
GINS3-203ENST00000426538 SYNJ2BPP57105 145 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 PROK1P58294 105 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 GUCA2BQ16661 112 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 C16orf54Q6UWD8 224 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 ELOVL1Q9BW60 279 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 AAMDCQ9H7C9 122 aa11.55□□□□□ -0.56
GINS3-203ENST00000426538 LGALS9O00182 355 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms