RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 CNPY1Q3B7I2 92 aa13.24□□□□□ -0.29
NUP50-207ENST00000424634 SPATA31B1PQ5VZV4 182 aa13.24□□□□□ -0.29
NUP50-207ENST00000424634 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
NUP50-207ENST00000424634 EBLN2Q6P2I7 272 aa13.24□□□□□ -0.29
NUP50-207ENST00000424634 SLC25A39Q9BZJ4 359 aaPredicted RBP13.24□□□□□ -0.29
NUP50-207ENST00000424634 C20orf85Q9H1P6 137 aa13.24□□□□□ -0.29
NUP50-207ENST00000424634 RPRMQ9NS64 109 aa13.24□□□□□ -0.29
NUP50-207ENST00000424634 IGHV3OR16-12A0A075B7B8 117 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 TRAV8-2A0A0B4J237 113 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 LYRM1O43325 122 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 MBPP02686 304 aaPredicted RBP13.23□□□□□ -0.29
NUP50-207ENST00000424634 PLP1P60201 277 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 DLK1P80370 383 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 SAMD13Q5VXD3 122 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 C1orf158Q8N1D5 194 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 NDUFA13Q9P0J0 144 aa13.23□□□□□ -0.29
NUP50-207ENST00000424634 IGHV4-4A0A075B6R2 117 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 C7orf66A4D0T2 115 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 SMIM9A6NGZ8 99 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 A8MTW9 85 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 CCSO14618 274 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 TSC22D2O75157 780 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 HYPMO75409 117 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 TCRBP04435 133 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 LINC00869P0C866 280 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 TAS2R30P59541 319 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 AMTNQ6UX39 209 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 PATE2Q6UY27 113 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 GPR82Q96P67 336 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 NPVFQ9HCQ7 196 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
NUP50-207ENST00000424634 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.29
NUP50-207ENST00000424634 DEFB131BA0A096LNP1 70 aa13.21□□□□□ -0.29
NUP50-207ENST00000424634 FNDC10F2Z333 226 aa13.21□□□□□ -0.29
NUP50-207ENST00000424634 EMP1P54849 157 aa13.21□□□□□ -0.29
NUP50-207ENST00000424634 SELENOTP62341 195 aa13.21□□□□□ -0.29
NUP50-207ENST00000424634 RNF182Q8N6D2 247 aa13.21□□□□□ -0.29
NUP50-207ENST00000424634 OR10P1Q8NGE3 313 aa13.21□□□□□ -0.29
NUP50-207ENST00000424634 UHRF2Q96PU4 802 aa13.21□□□□□ -0.29
NUP50-207ENST00000424634 K7EPK0 472 aa13.2□□□□□ -0.3
NUP50-207ENST00000424634 OR5G3P0C626 314 aa13.2□□□□□ -0.3
NUP50-207ENST00000424634 RAP2BP61225 183 aa13.2□□□□□ -0.3
NUP50-207ENST00000424634 FGL1Q08830 312 aa13.2□□□□□ -0.3
NUP50-207ENST00000424634 SLC38A11Q08AI6 406 aa13.2□□□□□ -0.3
NUP50-207ENST00000424634 SEC22CQ9BRL7 303 aa13.2□□□□□ -0.3
NUP50-207ENST00000424634 RNF126Q9BV68 326 aa13.2□□□□□ -0.3
NUP50-207ENST00000424634 PLA2G2EQ9NZK7 142 aa13.2□□□□□ -0.3
NUP50-207ENST00000424634 S100A7P31151 101 aa13.19□□□□□ -0.3
NUP50-207ENST00000424634 TEPPQ6URK8 271 aa13.19□□□□□ -0.3
NUP50-207ENST00000424634 ARL6Q9H0F7 186 aa13.19□□□□□ -0.3
NUP50-207ENST00000424634 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
NUP50-207ENST00000424634 TMEM189A5PLL7 270 aa13.18□□□□□ -0.3
NUP50-207ENST00000424634 SPART-AS1P0CW21 52 aa13.18□□□□□ -0.3
NUP50-207ENST00000424634 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
NUP50-207ENST00000424634 CNN1P51911 297 aaKnown RBP13.18□□□□□ -0.3
NUP50-207ENST00000424634 ZNF431Q8TF32 576 aaPredicted RBP13.18□□□□□ -0.3
NUP50-207ENST00000424634 C11orf1Q9H5F2 150 aa13.18□□□□□ -0.3
NUP50-207ENST00000424634 NUDT15Q9NV35 164 aa13.18□□□□□ -0.3
NUP50-207ENST00000424634 MGAT4CQ9UBM8 478 aa13.18□□□□□ -0.3
NUP50-207ENST00000424634 DKK2Q9UBU2 259 aa13.18□□□□□ -0.3
NUP50-207ENST00000424634 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
NUP50-207ENST00000424634 DNAH2Q9P225 4427 aa13.18□□□□□ -0.3
NUP50-207ENST00000424634 AGPAT2O15120 278 aa13.17□□□□□ -0.3
NUP50-207ENST00000424634 MRPS12O15235 138 aaKnown RBP13.17□□□□□ -0.3
NUP50-207ENST00000424634 OR11H7Q8NGC8 314 aa13.17□□□□□ -0.3
NUP50-207ENST00000424634 IGF2BP2-AS1Q96M15 143 aa13.17□□□□□ -0.3
NUP50-207ENST00000424634 GGACTQ9BVM4 153 aa13.17□□□□□ -0.3
NUP50-207ENST00000424634 ARV1Q9H2C2 271 aa13.17□□□□□ -0.3
NUP50-207ENST00000424634 A0A087X0K7 114 aa13.16□□□□□ -0.3
NUP50-207ENST00000424634 FAM25EA8MYX2 175 aa13.16□□□□□ -0.3
NUP50-207ENST00000424634 CRXO43186 299 aaPredicted RBP13.16□□□□□ -0.3
NUP50-207ENST00000424634 AMBPP02760 352 aa13.16□□□□□ -0.3
NUP50-207ENST00000424634 PRM2P04554 102 aa13.16□□□□□ -0.3
NUP50-207ENST00000424634 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
NUP50-207ENST00000424634 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
NUP50-207ENST00000424634 MGST2Q99735 147 aa13.16□□□□□ -0.3
NUP50-207ENST00000424634 LSM5Q9Y4Y9 91 aaKnown RBP13.16□□□□□ -0.3
NUP50-207ENST00000424634 HECTD4Q9Y4D8 3996 aa13.16□□□□□ -0.3
NUP50-207ENST00000424634 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 M0R2Z0 102 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 GOSR2O14653 212 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 DUSP14O95147 198 aaKnown RBP13.15□□□□□ -0.3
NUP50-207ENST00000424634 HBE1P02100 147 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 H2AFB2P0C5Z0 115 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 CXCL3P19876 107 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 ZNF846Q147U1 533 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 SPINK13Q1W4C9 94 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 C12orf45Q8N5I9 185 aaPredicted RBP13.15□□□□□ -0.3
NUP50-207ENST00000424634 ZNF738Q8NE65 137 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 CCDC32Q9BV29 185 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 DNAH17Q9UFH2 4485 aa13.15□□□□□ -0.3
NUP50-207ENST00000424634 C5orf51A6NDU8 294 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 L7N2F9 121 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 SNRPCP09234 159 aaKnown RBP13.14□□□□□ -0.31
NUP50-207ENST00000424634 VAMP2P63027 116 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 IL15RAQ13261 267 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 LINC00305Q7Z4B0 112 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 ZNF546Q86UE3 836 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms