RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 ZNF318Q5VUA4 2279 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 PTPRSQ13332 1948 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 PSG3Q16557 428 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 GGNQ86UU5 652 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 MALP21145 153 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 PAX8Q06710 450 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 PSPNO60542 156 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 IGHV1-46P01743 117 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 LGALS1P09382 135 aaKnown RBP11.32□□□□□ -0.6
SREBF2-202ENST00000424354 CACNA1DQ01668 2161 aa11.32□□□□□ -0.6
SREBF2-202ENST00000424354 SH2D1AO60880 128 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 IGHV2-70P01814 119 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 SPACA3Q8IXA5 215 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 DPH3Q96FX2 82 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 C10orf91Q5T1B1 145 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 COLCA1Q6ZS62 124 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 COL6A6A6NMZ7 2263 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
SREBF2-202ENST00000424354 ASCL4Q6XD76 172 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 DPH3P1Q9H4G8 78 aa11.31□□□□□ -0.6
SREBF2-202ENST00000424354 DOCK7Q96N67 2140 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 DENND4AQ7Z401 1863 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 C9JQL5 133 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 ZNF138P52744 262 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 C2orf82Q6UX34 121 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 OVOL2Q9BRP0 275 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 C10orf55Q5SWW7 151 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 ZNF329Q86UD4 541 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 TRAV8-1A0A0A6YYK1 113 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 Q6P435 159 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 BMPERQ8N8U9 685 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 CLPSP04118 112 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 S100A7L2Q5SY68 101 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 ADAMTSL5Q6ZMM2 481 aa11.3□□□□□ -0.6
SREBF2-202ENST00000424354 VCYO14598 125 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 ZC2HC1BQ5TFG8 222 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
SREBF2-202ENST00000424354 VOPP1Q96AW1 172 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 SNHG12Q9BXW3 62 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 CRPP02741 224 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 OCIAD2Q56VL3 154 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 STHQ8IWL8 128 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 IGHV2-26A0A0B4J1V2 119 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 C7orf69Q9H7B7 122 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 SPRR3Q9UBC9 169 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 KIF26BQ2KJY2 2108 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 PINLYPA6NC86 204 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
SREBF2-202ENST00000424354 SPINK8P0C7L1 97 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 CD177Q8N6Q3 437 aa11.29□□□□□ -0.6
SREBF2-202ENST00000424354 FAM231BA6NCW3 169 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 LINC00473A8K010 186 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 ADARB2-AS1A8MUL3 147 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 MLNRO43193 412 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 A0A0G2JRQ6 117 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 TNFRSF6BO95407 300 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 CD33P20138 364 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 FOXL2NBQ6ZUU3 175 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 CST9LQ9H4G1 147 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 ZNF492Q9P255 531 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 OOSP1A8MZH6 123 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 H0YJW9 148 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 CDKN1AP38936 164 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 Q86TA4 180 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 AKAP6Q13023 2319 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 IGHV2-5P01817 119 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 IGHV1-8P0DP01 117 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 ANAPC10Q9UM13 185 aa11.28□□□□□ -0.6
SREBF2-202ENST00000424354 TEX43Q6ZNM6 134 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 RNF144BQ7Z419 303 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 LINC00477Q96M19 166 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 RALGAPA1Q6GYQ0 2036 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 SNRNP200O75643 2136 aaKnown RBP11.27□□□□□ -0.61
SREBF2-202ENST00000424354 IGHV1-3A0A0C4DH29 117 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 CT83Q5H943 113 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 RASL10AQ92737 203 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 LINC00158P58513 81 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.61
SREBF2-202ENST00000424354 CD24P25063 80 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 C5orf63A6NC05 138 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 RPL15P61313 204 aaKnown RBP11.26□□□□□ -0.61
SREBF2-202ENST00000424354 GAGE1Q13065 139 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 TMEM249Q2WGJ8 235 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 Q6ZRM9 215 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 C18orf32Q8TCD1 76 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 PRSS22Q9GZN4 317 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 TRAV41A0A0B4J266 112 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 THBDP07204 575 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
SREBF2-202ENST00000424354 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 PLSCR4Q9NRQ2 329 aa11.26□□□□□ -0.61
SREBF2-202ENST00000424354 FOXG1P55316 489 aaPredicted RBP11.26□□□□□ -0.61
SREBF2-202ENST00000424354 FXYD7P58549 80 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms