RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PLECQ15149 4684 aaKnown RBP6.94□□□□□ -1.3
PDGFC-202ENST00000422544 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 HELTA6NFD8 242 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 OR4C46A6NHA9 309 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 H3BRN7 92 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 S100A7P31151 101 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 GCSAMLQ5JQS6 135 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 C1orf194Q5T5A4 169 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 C10orf113Q5VZT2 155 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 SIGLEC15Q6ZMC9 328 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 LINC00305Q7Z4B0 112 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 TCTE3Q8IZS6 198 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 STXBP6Q8NFX7 210 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 RFNGQ9Y644 331 aa6.93□□□□□ -1.3
PDGFC-202ENST00000422544 ELOA3CA0A087WX78 387 aaPredicted RBP6.92□□□□□ -1.3
PDGFC-202ENST00000422544 HMSDA8MTL9 139 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 C17orf112F2Z3M2 114 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 ZNF266Q14584 549 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 MORN5Q5VZ52 161 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 RPL7L1Q6DKI1 246 aaKnown RBP6.92□□□□□ -1.3
PDGFC-202ENST00000422544 S100A7AQ86SG5 101 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 AKAP14Q86UN6 197 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 DEFB125Q8N687 156 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 OR1L4Q8NGR5 311 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 PARD6GQ9BYG4 376 aaPredicted RBP6.92□□□□□ -1.3
PDGFC-202ENST00000422544 WFDC10AQ9H1F0 79 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 SLC25A32Q9H2D1 315 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 C19orf73Q9NVV2 129 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 UBQLN2Q9UHD9 624 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 SMAD5-AS1Q9Y6J3 95 aa6.92□□□□□ -1.3
PDGFC-202ENST00000422544 TRAV2A0A0B4J234 112 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 TRAV5A0A0B4J249 113 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 OR11H12B2RN74 326 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 K7EQG2 157 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 CXCL2P19875 107 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 CD300CQ08708 224 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 FFAR4Q5NUL3 377 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 KCNRGQ8N5I3 272 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 FAM24BQ8N5W8 94 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 HSD17B11Q8NBQ5 300 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 DCANP1Q8TF63 244 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 PFDN5Q99471 154 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 NRN1Q9NPD7 142 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 CYTL1Q9NRR1 136 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 KCNIP2Q9NS61 270 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
PDGFC-202ENST00000422544 TENM2Q9NT68 2774 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 BORCS7-ASMTA0A0B4J1R7 106 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 A0A0D9SG52 128 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 TAAR5O14804 337 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 SNRPCP09234 159 aaKnown RBP6.9□□□□□ -1.3
PDGFC-202ENST00000422544 IGHV4-30-4P0DP06 118 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 RPL7P18124 248 aaKnown RBP6.9□□□□□ -1.3
PDGFC-202ENST00000422544 ATP6V0CP27449 155 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 GALR1P47211 349 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 ZNF345Q14585 488 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 ODF3L2Q3SX64 289 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 FAM78BQ5VT40 261 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 SPATA31B1PQ5VZV4 182 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 APRG1Q8IVJ8 170 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 GATAD1Q8WUU5 269 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 C17orf77Q96MU5 243 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 GPR82Q96P67 336 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 TUBA4BQ9H853 241 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 SEPSECSQ9HD40 501 aaKnown RBP6.9□□□□□ -1.3
PDGFC-202ENST00000422544 RNF24Q9Y225 148 aa6.9□□□□□ -1.3
PDGFC-202ENST00000422544 MRPS12O15235 138 aaKnown RBP6.89□□□□□ -1.31
PDGFC-202ENST00000422544 JTBO76095 146 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 C1QBP02746 253 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 ZNF688P0C7X2 276 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 CMC4P56277 68 aaPredicted RBP6.89□□□□□ -1.31
PDGFC-202ENST00000422544 DEFB131AP59861 70 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 ZNF124Q15973 351 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 TMUB2Q71RG4 321 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 MIR17HGQ75NE6 70 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 CITED4Q96RK1 184 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 ARPC5LQ9BPX5 153 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 KRTAP17-1Q9BYP8 105 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 SH3BGRL3Q9H299 93 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 SRD5A3Q9H8P0 318 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 MAP6D1Q9H9H5 199 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 TIMM9Q9Y5J7 89 aa6.89□□□□□ -1.31
PDGFC-202ENST00000422544 RBMY1BA6NDE4 496 aaKnown RBP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 RBMY1EA6NEQ0 496 aaKnown RBP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 SOCS3O14543 225 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 EIF3GO75821 320 aaKnown RBP eCLIP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 RBMY1DP0C7P1 496 aaKnown RBP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 FRMD6-AS1P0C7T7 363 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 ATF4P18848 351 aaPredicted RBP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 RAB2AP61019 212 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 ACOT6Q3I5F7 207 aaPredicted RBP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 LGALSLQ3ZCW2 172 aaPredicted RBP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 PSMG4Q5JS54 123 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 IGFL4Q6B9Z1 124 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 BPIFA4PQ86YQ2 179 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 GNPNAT1Q96EK6 184 aaPredicted RBP6.88□□□□□ -1.31
PDGFC-202ENST00000422544 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
PDGFC-202ENST00000422544 HYLS1Q96M11 299 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms