RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PRR20EP86478 221 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 PRR20CP86479 221 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 PRR20DP86480 221 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 PRR20BP86481 221 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 PRR20AP86496 221 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 PSG9Q00887 426 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 S100A7AQ86SG5 101 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 DOK5Q9P104 306 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 HIGD1AQ9Y241 93 aa18.21■□□□□ 0.51
VEGFA-208ENST00000417285 IGHV4-4A0A075B6R2 117 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 DEFB131BA0A096LNP1 70 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 H3BRN7 92 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 HYPMO75409 117 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 MBPP02686 304 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-208ENST00000417285 LINC00869P0C866 280 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 GSG1LQ6UXU4 331 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 SCRT1Q9BWW7 348 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 SLC25A39Q9BZJ4 359 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-208ENST00000417285 NUDT15Q9NV35 164 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 CELA1Q9UNI1 258 aa18.2■□□□□ 0.5
VEGFA-208ENST00000417285 CCSO14618 274 aa18.19■□□□□ 0.5
VEGFA-208ENST00000417285 SPART-AS1P0CW21 52 aa18.19■□□□□ 0.5
VEGFA-208ENST00000417285 FXYD7P58549 80 aa18.19■□□□□ 0.5
VEGFA-208ENST00000417285 PLP1P60201 277 aa18.19■□□□□ 0.5
VEGFA-208ENST00000417285 TEPPQ6URK8 271 aa18.19■□□□□ 0.5
VEGFA-208ENST00000417285 LINC00299Q6ZSB3 139 aa18.19■□□□□ 0.5
VEGFA-208ENST00000417285 ZNF431Q8TF32 576 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-208ENST00000417285 SHANK2-AS3Q9BTD1 123 aa18.19■□□□□ 0.5
VEGFA-208ENST00000417285 A0A0J9YX75 114 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 C7orf66A4D0T2 115 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 L7N2F9 121 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 VAMP2P63027 116 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 FAM78BQ5VT40 261 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 ZNF709Q8N972 641 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 C20orf173Q96LM9 149 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 GGACTQ9BVM4 153 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 RFNGQ9Y644 331 aa18.18■□□□□ 0.5
VEGFA-208ENST00000417285 FAM25EA8MYX2 175 aa18.17■□□□□ 0.5
VEGFA-208ENST00000417285 F6UB75 175 aa18.17■□□□□ 0.5
VEGFA-208ENST00000417285 K7EPK0 472 aa18.17■□□□□ 0.5
VEGFA-208ENST00000417285 OR5G3P0C626 314 aa18.17■□□□□ 0.5
VEGFA-208ENST00000417285 RPL7P18124 248 aaKnown RBP18.17■□□□□ 0.5
VEGFA-208ENST00000417285 C17orf77Q96MU5 243 aa18.17■□□□□ 0.5
VEGFA-208ENST00000417285 SEC22CQ9BRL7 303 aa18.17■□□□□ 0.5
VEGFA-208ENST00000417285 GOLT1BQ9Y3E0 138 aa18.17■□□□□ 0.5
VEGFA-208ENST00000417285 FRAS1Q86XX4 4008 aa18.17■□□□□ 0.5
VEGFA-208ENST00000417285 IGHV3OR16-12A0A075B7B8 117 aa18.16■□□□□ 0.5
VEGFA-208ENST00000417285 TEX48A0A1B0GUV7 120 aa18.16■□□□□ 0.5
VEGFA-208ENST00000417285 C5orf51A6NDU8 294 aa18.16■□□□□ 0.5
VEGFA-208ENST00000417285 AMBPP02760 352 aa18.16■□□□□ 0.5
VEGFA-208ENST00000417285 H2AFB2P0C5Z0 115 aa18.16■□□□□ 0.5
VEGFA-208ENST00000417285 SLC35B3Q9H1N7 401 aa18.16■□□□□ 0.5
VEGFA-208ENST00000417285 RNF24Q9Y225 148 aa18.16■□□□□ 0.5
VEGFA-208ENST00000417285 DNAH10Q8IVF4 4471 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 FAM240BA0A1B0GVZ2 78 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 FGL1Q08830 312 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 SLC38A11Q08AI6 406 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 ZNF767PQ75MW2 155 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 ZNF546Q86UE3 836 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 C12orf45Q8N5I9 185 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-208ENST00000417285 S100ZQ8WXG8 99 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 NDUFAF3Q9BU61 184 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 ARL6Q9H0F7 186 aa18.15■□□□□ 0.5
VEGFA-208ENST00000417285 LSM5Q9Y4Y9 91 aaKnown RBP18.15■□□□□ 0.5
VEGFA-208ENST00000417285 GOSR2O14653 212 aa18.14■□□□□ 0.49
VEGFA-208ENST00000417285 EMP1P54849 157 aa18.14■□□□□ 0.49
VEGFA-208ENST00000417285 PXDC1Q5TGL8 231 aa18.14■□□□□ 0.49
VEGFA-208ENST00000417285 MZT2BQ6NZ67 158 aa18.14■□□□□ 0.49
VEGFA-208ENST00000417285 UHRF2Q96PU4 802 aa18.14■□□□□ 0.49
VEGFA-208ENST00000417285 BCAP31P51572 246 aa18.13■□□□□ 0.49
VEGFA-208ENST00000417285 ARL16Q0P5N6 197 aa18.13■□□□□ 0.49
VEGFA-208ENST00000417285 C2orf50Q96LR7 162 aa18.13■□□□□ 0.49
VEGFA-208ENST00000417285 A8MTW9 85 aa18.12■□□□□ 0.49
VEGFA-208ENST00000417285 DUSP14O95147 198 aaKnown RBP18.12■□□□□ 0.49
VEGFA-208ENST00000417285 HBE1P02100 147 aa18.12■□□□□ 0.49
VEGFA-208ENST00000417285 P0DMU3 169 aa18.12■□□□□ 0.49
VEGFA-208ENST00000417285 FAM231AP0DMU4 169 aa18.12■□□□□ 0.49
VEGFA-208ENST00000417285 FAM231CP0DMU5 169 aa18.12■□□□□ 0.49
VEGFA-208ENST00000417285 FAM210BQ96KR6 192 aa18.12■□□□□ 0.49
VEGFA-208ENST00000417285 ARV1Q9H2C2 271 aa18.12■□□□□ 0.49
VEGFA-208ENST00000417285 TRAV8-2A0A0B4J237 113 aa18.11■□□□□ 0.49
VEGFA-208ENST00000417285 AGPAT2O15120 278 aa18.11■□□□□ 0.49
VEGFA-208ENST00000417285 PVALBP20472 110 aaPredicted RBP18.11■□□□□ 0.49
VEGFA-208ENST00000417285 CAV2P51636 162 aa18.11■□□□□ 0.49
VEGFA-208ENST00000417285 DKK2Q9UBU2 259 aa18.11■□□□□ 0.49
VEGFA-208ENST00000417285 A0A087X0K7 114 aa18.1■□□□□ 0.49
VEGFA-208ENST00000417285 OXA1LQ15070 435 aa18.1■□□□□ 0.49
VEGFA-208ENST00000417285 IGFL4Q6B9Z1 124 aa18.1■□□□□ 0.49
VEGFA-208ENST00000417285 PATE2Q6UY27 113 aa18.1■□□□□ 0.49
VEGFA-208ENST00000417285 C1orf158Q8N1D5 194 aa18.1■□□□□ 0.49
VEGFA-208ENST00000417285 RNF182Q8N6D2 247 aa18.1■□□□□ 0.49
VEGFA-208ENST00000417285 LRRC20Q8TCA0 184 aa18.1■□□□□ 0.49
VEGFA-208ENST00000417285 IGF2BP2-AS1Q96M15 143 aa18.1■□□□□ 0.49
VEGFA-208ENST00000417285 CNN1P51911 297 aaKnown RBP18.09■□□□□ 0.49
VEGFA-208ENST00000417285 ASAH1Q13510 395 aa18.09■□□□□ 0.49
VEGFA-208ENST00000417285 RAB31Q13636 194 aa18.09■□□□□ 0.49
VEGFA-208ENST00000417285 RRN3P1Q2M238 152 aa18.09■□□□□ 0.49
VEGFA-208ENST00000417285 AMTNQ6UX39 209 aa18.09■□□□□ 0.49
VEGFA-208ENST00000417285 POM121L12Q8N7R1 296 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms