RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 SMIM8Q96KF7 97 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FAM19A4Q96LR4 140 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 Q96M85 177 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ERMAPQ96PL5 475 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CGREF1Q99674 301 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ZNF251Q9BRH9 671 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TMEM109Q9BVC6 243 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 MAP1LC3CQ9BXW4 147 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 RERGLQ9H628 205 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PARP11Q9NR21 331 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 NKIRAS1Q9NYS0 192 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ANXA10Q9UJ72 324 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TRAPPC1Q9Y5R8 145 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IER3IP1Q9Y5U9 82 aa1.49□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TANC2Q9HCD6 1990 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 SORL1Q92673 2214 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IGKV1-27A0A075B6S5 117 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TRAV27A0A087WT01 109 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 A0A087WUU8 490 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TRAV10A0A0B4J240 114 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IGKV2-24A0A0C4DH68 120 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 LOC100506127A0A0U1RQW1 187 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 DHRS12A0PJE2 317 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PQLC2LA1A4F0 135 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ODAMA1E959 279 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TMEM189A5PLL7 270 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 OR4C46A6NHA9 309 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 OR5H14A6NHG9 310 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 K7EP13 123 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 K7ERS5 55 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 MRPS14O60783 128 aaKnown RBP1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 HAND1O96004 215 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 HRASP01112 189 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 KRASP01116 189 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IFNA10P01566 189 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 HMGN1P05114 100 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PTHLHP12272 177 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CCL3L1P16619 93 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 NTF3P20783 257 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 KDELR2P33947 212 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CBX5P45973 191 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 RPS11P62280 158 aaKnown RBP eCLIP1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TSPAN31Q12999 210 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TPBGQ13641 420 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 GPR176Q14439 515 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PLGLAQ15195 96 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 MMDQ15546 238 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 LUZP6Q538Z0 58 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 C6orf183Q5T699 404 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TMEM42Q69YG0 159 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 MORN3Q6PF18 240 aaPredicted RBP1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FA2HQ7L5A8 372 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 OLIG3Q7RTU3 272 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 LYG2Q86SG7 212 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 Q8N6K4 173 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 DRAXINQ8NBI3 349 aaPredicted RBP1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 OR51T1Q8NGJ9 327 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 OR2AE1Q8NHA4 323 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PFN4Q8NHR9 129 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 OTOSQ8NHW6 89 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 DYNLRB2Q8TF09 96 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 DNAJC9Q8WXX5 260 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TAMM41Q96BW9 452 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 MRPS24Q96EL2 167 aaKnown RBP1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 NMNAT3Q96T66 252 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 HOPXQ9BPY8 73 aaPredicted RBP1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 WFDC6Q9BQY6 131 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 SEC22CQ9BRL7 303 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 YIPF3Q9GZM5 350 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 SRRQ9GZT4 340 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ACOT13Q9NPJ3 140 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 C12orf4Q9NQ89 552 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 OR2S2Q9NQN1 319 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 RBFOX1Q9NWB1 397 aaKnown RBP1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IL20Q9NYY1 176 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IDI2-AS1Q9NZ38 188 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CCDC167Q9P0B6 97 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 VAX2Q9UIW0 290 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FAT2Q9NYQ8 4349 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 DNAH2Q9P225 4427 aa1.48□□□□□ -2.17
RNU6-1140P-201ENST00000410517 DYNC1H1Q14204 4646 aaKnown RBP1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 DNAH5Q8TE73 4624 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 NUP214P35658 2090 aaPredicted RBP1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 MYCBP2O75592 4640 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 HSPG2P98160 4391 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 A0A1B0GTI1 187 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 C16orf90A8MZG2 172 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 H7C1C5 153 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ITGB1BP1O14713 200 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 DEGS1O15121 323 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FABP7O15540 132 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CRXO43186 299 aaPredicted RBP1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TGOLN2O43493 480 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 COX7A2P2O60397 106 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 SULT1C4O75897 302 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 NDUFA3O95167 84 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FADS2O95864 444 aaKnown RBP1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FAM107AO95990 144 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PTTG1O95997 202 aa1.47□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TRGV3P03979 118 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms