RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 A0A1B0GW15 77 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 UPK2O00526 184 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 IGHV1-46P01743 117 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 ZNF497Q6ZNH5 498 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 DEPPQ9NTK1 212 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 YPEL1O60688 119 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 YPEL2Q96QA6 119 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 PSG8Q9UQ74 426 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 MPTX1A8MV57 137 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 NIT1Q86X76 327 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 GGTLC1Q9BX51 225 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 DMRT1Q9Y5R6 373 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 TRBV5-7A0A0A0MS05 114 aa9.27□□□□□ -0.92
PRPF40A-202ENST00000410080 A8MXK9 166 aa9.27□□□□□ -0.92
PRPF40A-202ENST00000410080 XCL2Q9UBD3 114 aa9.27□□□□□ -0.92
PRPF40A-202ENST00000410080 UBE2BP63146 152 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 CTHRC1Q96CG8 243 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 ANAPC13Q9BS18 74 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 PQLC2LA1A4F0 135 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 PRR31Q5SQ13 230 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 EPDR1Q9UM22 224 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 DEFB105AQ8NG35 78 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 H3BUT2 72 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 SCRT1Q9BWW7 348 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 RPUSD1Q9UJJ7 312 aaKnown RBP9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 ATRXP46100 2492 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 NCR2O95944 276 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 ADMP35318 185 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 RMI2Q96E14 147 aa9.27□□□□□ -0.93
PRPF40A-202ENST00000410080 CD5P06127 495 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 DDTP30046 118 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 LINC00477Q96M19 166 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 PIN1P1O15428 100 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 MEGF9Q9H1U4 602 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 PINLYPA6NC86 204 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 CSRP1P21291 193 aaKnown RBP9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 SAA4P35542 130 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 SPXQ9BT56 116 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 CSTL1Q9H114 145 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 CLDN16Q9Y5I7 305 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 EFNA2O43921 213 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 Q9HAA7 133 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 RASL10AQ92737 203 aa9.26□□□□□ -0.93
PRPF40A-202ENST00000410080 TPTE2P1Q5T6R2 138 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 IGF2BP2-AS1Q96M15 143 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 SLC25A16P16260 332 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 PRDM13Q9H4Q3 707 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 IGHV1-3A0A0C4DH29 117 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 J3QKU1 62 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 IGFL4Q6B9Z1 124 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 ATP5L2Q7Z4Y8 100 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 PCNX3Q9H6A9 2034 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 TNFRSF14Q92956 283 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 H2BFSP57053 126 aa9.25□□□□□ -0.93
PRPF40A-202ENST00000410080 TMEM178BH3BS89 294 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 TNFRSF6BO95407 300 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 KLF17Q5JT82 389 aaPredicted RBP9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 ZNF660Q6AZW8 331 aaPredicted RBP9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 TRAV8-3A0A0A6YYJ7 113 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 PLPPR1Q8TBJ4 325 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 NOTCH4Q99466 2003 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 TRAV8-1A0A0A6YYK1 113 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 DKK1O94907 266 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 PFN2P35080 140 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 DEFB131AP59861 70 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 IGLV3-21P80748 117 aaPredicted RBP9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 MESP1Q9BRJ9 268 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 PRB1P04280 392 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 AZU1P20160 251 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 GAGE2AQ6NT46 116 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 TRAV5A0A0B4J249 113 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 FAM223BA6NKX1 122 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 FAM223AQ8IWN6 122 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 USMG5Q96IX5 58 aa9.24□□□□□ -0.93
PRPF40A-202ENST00000410080 IGHV1-8P0DP01 117 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 PRTN3P24158 256 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 C1orf100Q5SVJ3 147 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 Q8TAT8 98 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 LINC01619G3V211 115 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 PRIMA1Q86XR5 153 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 C14orf178Q8N769 122 aaPredicted RBP9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 DNAJC30Q96LL9 226 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 TEX48A0A1B0GUV7 120 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 LINC01590Q5TEZ4 76 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 RPL18AQ02543 176 aaKnown RBP9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 TAL2Q16559 108 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 MINOS1Q5TGZ0 78 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 MINOS1-NBL1R4GNA1 71 aa9.23□□□□□ -0.93
PRPF40A-202ENST00000410080 IGKV2D-24A0A075B6R9 120 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 D6R8Y8 96 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 OCIAD2Q56VL3 154 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 BUB1B-PAK6H3BSN5 160 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 SPINK13Q1W4C9 94 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 VWC2Q2TAL6 325 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 PPP1R3EQ9H7J1 279 aa9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 MRPS18CQ9Y3D5 142 aaKnown RBP9.22□□□□□ -0.93
PRPF40A-202ENST00000410080 A8MWV9 139 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms