RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 Q8N2B8 174 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 STPG2Q8N412 459 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 C9orf62Q8N4C0 152 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 TMEM252Q8N6L7 170 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 SIGLECL1Q8N7X8 197 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 OR1L8Q8NGR8 309 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 GRPEL2Q8TAA5 225 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 SRSF12Q8WXF0 261 aaKnown RBP3.05□□□□□ -1.92
CLK1-203ENST00000409769 SMIM8Q96KF7 97 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 CXorf58Q96LI9 332 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 HYLS1Q96M11 299 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 AQP10Q96PS8 301 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 HSPB9Q9BQS6 159 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 COMMD5Q9GZQ3 224 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 MAGT1Q9H0U3 335 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 ESM1Q9NQ30 184 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 LYRM2Q9NU23 88 aaPredicted RBP3.05□□□□□ -1.92
CLK1-203ENST00000409769 FKBP11Q9NYL4 201 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 CACFD1Q9UGQ2 172 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 PITPNC1Q9UKF7 332 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 VPREB3Q9UKI3 123 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 KLK9Q9UKQ9 250 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 LSM5Q9Y4Y9 91 aaKnown RBP3.05□□□□□ -1.92
CLK1-203ENST00000409769 OR51B2Q9Y5P1 312 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 MXRA5Q9NR99 2828 aa3.05□□□□□ -1.92
CLK1-203ENST00000409769 SETXQ7Z333 2677 aaKnown RBP3.05□□□□□ -1.92
CLK1-203ENST00000409769 C2CD3Q4AC94 2353 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 FXYD6-FXYD2A0A087WZ82 144 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 IGSF23A1L1A6 192 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 FAM24AA6NFZ4 105 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 NCBP2LA6PVI3 153 aaKnown RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 WRBO00258 174 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 ARPC5O15511 151 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 SSSCA1O60232 199 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 IFNA17P01571 189 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 IGHG2P01859 326 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 OPN1MWP04001 364 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 RLN2P04090 185 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 IGF1P05019 195 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 CRYGCP07315 174 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 OPN1MW2P0DN77 364 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 OPN1MW3P0DN78 364 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 RNASE2P10153 161 aaKnown RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 IAPPP10997 89 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 CTRB1P17538 263 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 CXCL2P19875 107 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 SRP14P37108 136 aaKnown RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 RPL27AP46776 148 aaKnown RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 NKX2-5P52952 324 aaPredicted RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 BLCAPP62952 87 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 SCGB2A2Q13296 93 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 FXYD3Q14802 87 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 TNXAQ16473 311 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 LGALSLQ3ZCW2 172 aaPredicted RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 SPINK9Q5DT21 86 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 CTRB2Q6GPI1 263 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 ATRAIDQ6UW56 229 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 HSD17B13Q7Z5P4 300 aaPredicted RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 TTC9CQ8N5M4 171 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 OR10W1Q8NGF6 305 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 SGMS2Q8NHU3 365 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 VN1R17PQ8TDU5 208 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 DTD1Q8TEA8 209 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 DCUN1D4Q92564 292 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 ARPC1AQ92747 370 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 CIB3Q96Q77 187 aaPredicted RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 OR4C12Q96R67 309 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 CLCC1Q96S66 551 aa3.04□□□□□ -1.92
CLK1-203ENST00000409769 FAM103A1Q9BTL3 118 aaKnown RBP3.04□□□□□ -1.92
CLK1-203ENST00000409769 A0A0D9SG52 128 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 BTBD17A6NE02 478 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 CEBPZOSA8MTT3 80 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 H3BP45 60 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 L7N2F9 121 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 BRI3O95415 125 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 OR13C7P0DN81 318 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 AREGP15514 252 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 PVALBP20472 110 aaPredicted RBP3.03□□□□□ -1.92
CLK1-203ENST00000409769 MDKP21741 143 aaPredicted RBP3.03□□□□□ -1.92
CLK1-203ENST00000409769 NPY1RP25929 384 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 RPL12P30050 165 aaKnown RBP3.03□□□□□ -1.92
CLK1-203ENST00000409769 HTR2BP41595 481 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 EIF2B2P49770 351 aaKnown RBP3.03□□□□□ -1.92
CLK1-203ENST00000409769 SULT1A1P50225 295 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 ATP5IP56385 69 aaPredicted RBP3.03□□□□□ -1.92
CLK1-203ENST00000409769 RPL23AP62750 156 aaKnown RBP3.03□□□□□ -1.92
CLK1-203ENST00000409769 UBA52P62987 128 aaKnown RBP3.03□□□□□ -1.92
CLK1-203ENST00000409769 ERHP84090 104 aaKnown RBP3.03□□□□□ -1.92
CLK1-203ENST00000409769 EWSR1Q01844 656 aaKnown RBP eCLIP3.03□□□□□ -1.92
CLK1-203ENST00000409769 BAXQ07812 192 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 OR2F1Q13607 317 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 PLGLAQ15195 96 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 AKIRIN2Q53H80 203 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 C2orf83Q53S99 150 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 ACOT7LQ6ZUV0 252 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 ZNF546Q86UE3 836 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 KCNRGQ8N5I3 272 aa3.03□□□□□ -1.92
CLK1-203ENST00000409769 OR1P1Q8NH06 330 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms