RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 RNF24Q9Y225 148 aa14.68□□□□□ -0.06
PDLIM2-207ENST00000409417 COX7A2P2O60397 106 aa14.67□□□□□ -0.06
PDLIM2-207ENST00000409417 TMEM37Q8WXS4 190 aa14.67□□□□□ -0.06
PDLIM2-207ENST00000409417 ATP5SQ99766 215 aa14.67□□□□□ -0.06
PDLIM2-207ENST00000409417 RSG1Q9BU20 258 aa14.67□□□□□ -0.06
PDLIM2-207ENST00000409417 DNAJC4Q9NNZ3 241 aa14.67□□□□□ -0.06
PDLIM2-207ENST00000409417 SLC39A9Q9NUM3 307 aa14.67□□□□□ -0.06
PDLIM2-207ENST00000409417 KIR2DL5BA0A0G2JN68 375 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 KIR2DL5BA0A0G2JPC4 375 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 RPL7P18124 248 aaKnown RBP14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 APOC4P55056 127 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 B2MP61769 119 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 PSMG4Q5JS54 123 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 SAMD13Q5VXD3 122 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 LINC00305Q7Z4B0 112 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 KIR2DL5AQ8N109 375 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 KIR2DL5BQ8NHK3 375 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 RCHY1Q96PM5 261 aa14.66□□□□□ -0.06
PDLIM2-207ENST00000409417 SOCS3O14543 225 aa14.65□□□□□ -0.06
PDLIM2-207ENST00000409417 ID1P41134 155 aa14.65□□□□□ -0.06
PDLIM2-207ENST00000409417 MEOX2P50222 304 aa14.65□□□□□ -0.06
PDLIM2-207ENST00000409417 Q5BKY6 102 aa14.65□□□□□ -0.06
PDLIM2-207ENST00000409417 C10orf113Q5VZT2 155 aa14.65□□□□□ -0.06
PDLIM2-207ENST00000409417 WDR61Q9GZS3 305 aaKnown RBP14.65□□□□□ -0.06
PDLIM2-207ENST00000409417 PXMP4Q9Y6I8 212 aa14.65□□□□□ -0.06
PDLIM2-207ENST00000409417 RPL35AP18077 110 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-207ENST00000409417 PSMB3P49720 205 aa14.64□□□□□ -0.07
PDLIM2-207ENST00000409417 OR1L4Q8NGR5 311 aa14.64□□□□□ -0.07
PDLIM2-207ENST00000409417 C17orf77Q96MU5 243 aa14.64□□□□□ -0.07
PDLIM2-207ENST00000409417 HUWE1Q7Z6Z7 4374 aaKnown RBP14.64□□□□□ -0.07
PDLIM2-207ENST00000409417 ISLRO14498 428 aa14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 ZNF709Q8N972 641 aa14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 OR2T35Q8NGX2 323 aa14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 PFDN5Q99471 154 aa14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 SMIM3Q9BZL3 60 aa14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 UBE2CO00762 179 aa14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 ATF4P18848 351 aaPredicted RBP14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 AQP10Q96PS8 301 aa14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 KCNIP2Q9NS61 270 aa14.63□□□□□ -0.07
PDLIM2-207ENST00000409417 IFNA5P01569 189 aa14.62□□□□□ -0.07
PDLIM2-207ENST00000409417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.62□□□□□ -0.07
PDLIM2-207ENST00000409417 STHQ8IWL8 128 aa14.62□□□□□ -0.07
PDLIM2-207ENST00000409417 GATAD1Q8WUU5 269 aa14.62□□□□□ -0.07
PDLIM2-207ENST00000409417 CSTL1Q9H114 145 aa14.62□□□□□ -0.07
PDLIM2-207ENST00000409417 KNCNA6PVL3 124 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 ACTL10Q5JWF8 245 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 MORN5Q5VZ52 161 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 Q6ZWC4 215 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 SCGB1C1Q8TD33 95 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 C16orf92Q96LL3 132 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 LINC00052Q96N35 136 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 WFDC1Q9HC57 220 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 RETNQ9HD89 108 aa14.61□□□□□ -0.07
PDLIM2-207ENST00000409417 A0A087X0K7 114 aa14.6□□□□□ -0.07
PDLIM2-207ENST00000409417 C17orf112F2Z3M2 114 aa14.6□□□□□ -0.07
PDLIM2-207ENST00000409417 MRPS12O15235 138 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-207ENST00000409417 TRPT1Q86TN4 253 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-207ENST00000409417 BPIFA4PQ86YQ2 179 aa14.6□□□□□ -0.07
PDLIM2-207ENST00000409417 PARD6GQ9BYG4 376 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-207ENST00000409417 INO80EQ8NBZ0 244 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-207ENST00000409417 AGRNO00468 2067 aa14.59□□□□□ -0.07
PDLIM2-207ENST00000409417 FXYD6-FXYD2A0A087WZ82 144 aa14.58□□□□□ -0.08
PDLIM2-207ENST00000409417 GCSAMLQ5JQS6 135 aa14.58□□□□□ -0.08
PDLIM2-207ENST00000409417 WWC2-AS2Q96NR7 200 aa14.58□□□□□ -0.08
PDLIM2-207ENST00000409417 OVOL2Q9BRP0 275 aa14.58□□□□□ -0.08
PDLIM2-207ENST00000409417 TP53TG1Q9Y2A0 90 aa14.58□□□□□ -0.08
PDLIM2-207ENST00000409417 G3V3Q6 166 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 FOXI2Q6ZQN5 318 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 TNFSF18Q9UNG2 199 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 TRAV8-2A0A0B4J237 113 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 TRAV5A0A0B4J249 113 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 H3BMM0 161 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 HLA-DRB4P13762 266 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 DEFB135Q30KP9 77 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 C20orf173Q96LM9 149 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 HRH4Q9H3N8 390 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 RPRMQ9NS64 109 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 HLA-DRB4X5D2U9 266 aa14.57□□□□□ -0.08
PDLIM2-207ENST00000409417 SPRY2O43597 315 aa14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 IGLC2P0DOY2 106 aa14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 SPP1P10451 314 aa14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 CXCL2P19875 107 aa14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 ZNF266Q14584 549 aa14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 FAM78BQ5VT40 261 aa14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 SPATA31B1PQ5VZV4 182 aa14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 RNF183Q96D59 192 aa14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 SAV1Q9H4B6 383 aaPredicted RBP14.56□□□□□ -0.08
PDLIM2-207ENST00000409417 RNF222A6NCQ9 220 aa14.55□□□□□ -0.08
PDLIM2-207ENST00000409417 CA1P00915 261 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-207ENST00000409417 DEFB1P60022 68 aa14.55□□□□□ -0.08
PDLIM2-207ENST00000409417 MORN3Q6PF18 240 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-207ENST00000409417 LCN15Q6UWW0 184 aa14.55□□□□□ -0.08
PDLIM2-207ENST00000409417 LRRC20Q8TCA0 184 aa14.55□□□□□ -0.08
PDLIM2-207ENST00000409417 GIG44P09565 113 aaPredicted RBP14.54□□□□□ -0.08
PDLIM2-207ENST00000409417 FFAR4Q5NUL3 377 aa14.54□□□□□ -0.08
PDLIM2-207ENST00000409417 GDF5OSQ5U4N7 250 aa14.54□□□□□ -0.08
PDLIM2-207ENST00000409417 IGFL4Q6B9Z1 124 aa14.54□□□□□ -0.08
PDLIM2-207ENST00000409417 RNF182Q8N6D2 247 aa14.54□□□□□ -0.08
PDLIM2-207ENST00000409417 TMEM14CQ9P0S9 112 aa14.54□□□□□ -0.08
PDLIM2-207ENST00000409417 H3BQ15 152 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms